Contig Data
morexGenes
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Map Locations of contig_352501 (2666 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_352501

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_50008 2 1163 bp MLOC_50008.2 Available Available LOC_Os10g25130.1, FRAME:+2, EVALUE:1e-25, 13110.m02113 protein aminotransferase, classes I and II, domain containing protein, expressed
MLOC_50009 1 643 bp MLOC_50009.1 Available Available None





CDS Structure of MLOC_50008






CDS Structure of MLOC_50009






Contig Sequence (2666 bp)

>contig_352501 2666 assembly3_WGSMorex_rbca.fasta
ATTTACACACTTGTGTATTATACCTTCATCTATCTATGTATTTATTTAGAATTTTTTGAA
ACATTAAAATACAAATTTTCACTGAATTTGAAGTTTGAATTTAAAGGCCTCCAGTGAGCT
CGGGAGCCAAAAGCAATATTCGCAATATTACCACCTAAAAGGTCACCGAGCTAGCTGGTA
ATACCACAAGGTGTCAATGACAAGTGGCACTAGCCACTAGGCCTCGCATGCCATCATCCT
CCCACTGGACGATATTTGCAGACCAATAGTTTATTATAAGTTCATTATCTTTCCAGTTTC
AAGAATGTACTGGCATTCTGTGCTATGTTTGTTTGAGTCACTGATTAATTCTTGACCATC
ACTTGATCAACTATGTGCACTTTTAATACCTAGCCACTTCGCTAATTATCTTATGGCTGC
TGCAGGTTTTAAAATGTGAGTATGCTGTGCGTGGAGAGATTGTCATCCATGCTCATGTAT
TTCAAGTGACTAACAAGTGTTATTTCAGTAATCTGAAATCTGCTGTATTCAGAGTTTAGC
CAACTCTTTAGTCGTGTTCTTAGATATTCAGCAAGTCTAATAAAAGTTTAGTAGGTTGCA
CTTTTATTCTGACTTTTGACAAGCAATTGTTTGGTATTAGTAATAGTTTGGCATGCTTTT
AAAAACAGAGCAACTTACCTGGCATTTCCTGAAAGACGCCAGTTCATGTGCCATTAAGTA
CTTAGAAATTGATTAACCTGGTAATTTTGTTTTTGTTTCCAGCTCTTGCAGGAACAGCTA
AAAACTCAACCAGGGTCTCTACCTTTTGATGAGGTACTTAAGCATAGATTCTGCACACTA
ATGTTATAGATAGTTTTCTTGTTATGTTCTACAGTTTCTTAGCTCATTCAGTTTTTTCCC
TTGCAGATCCTCTATTGTAACATTGGGAAGTCACAATCTCTTGGTCAGCAACCAGTTACA
TTCTTCAGGAAGGTATGTGAATTTTCTACCTGCATAGTTTAAAGTTTGTTCTGCTGGATT
TGTACATGGTATATTACACGTTCTTGCACTTTGTCATCATCCAGACCTGTTGCAAAGAGA
GGAAATCAAAACATTGTTCAGGTGAATGTCGGCATCATTGCATCTCATCAGCATGAAACA
AATGCAAGGAAAACTTAGTACGGGAGGATATGTGACGGATACCCTTAACCAAGCGCTATC
ATGCTATTTTTTTGCGATTCAAATGAAATTGAATAATTGCAAGAACACAAAACACAATTG
TGGAGTAAAAGTATTGCCATAGTGTGACATATCAATCTGCAAAATTTCATGCCTATAATT
TATAGGTGCTAAAAAACGATACTTGTTGTGTGCTACCACTTCTGATTGACTATGAAAAAT
ACATATAACTAATTCATTTGTCTTAGCGGGAACTTGTTGCATATATGATATCTGATGCTT
CATCTTGTTGCAGTGCTGATTCTATTTCTCGAGCAAAGCAGATTCTTGCCATGATACCTG
GAAGAGCAACGGGAGCATACAGCCATAGCCAGGTAATCGTCTCATTGCGTAGTTTATTAC
TTGCCGCAAGGAGAAAAATGTGGAATTTTGCATTCAATTTTTTTTACCATTCTCCTAGGG
TATCATCTACTACCACTGAAAAAGAAAGAGAGGCAGATCCAAATACAAATCTGGACCCTC
TAATCACATAATCAACGGTCTAAATGCTTTGTTAACGAAACTAATGAAATCTTCCTAATC
CTTCCTCGCACCTACCTTAAAAAAAACTCACTCGCACCTCGCACGTCCTCTTCGTGCAGA
TCGCACCTTGCCCGCACCTTAGCTCGGCCGCATCCGCCCGTGCAGATCGCCACCCACTGG
GCAGCGGTCGCCCCGCCTGCACCGGTCGCCGCCCACAGTTGACCCGCCTGCGTCGGTCGT
CGCCGTGCTCGCTTGCCCCGCCCACTCGCCGTGCTCGCGCCCCGCTGGTCACCGCCCGCC
CGCCGCGCCGCGTCTCGCTCGCCCCAAGCTAGGCTTAGCTCAACCGCTGGCAGCGGACAT
ATGTTGATAATGAGCATATGTTACAGTATGCTGCTCTTGCTCAGCTGTGCCCGTCAAGCA
TATGTTCTTTGAGTTTATAACTTTAGATGCTGTGTGGATATAACTCTACTCAATAATGTA
AATGAAGTGTGCAGTGGCTCAGTTCTTTAGATCTTCAGCTTACAGAACCCAAGAGCTCTA
CTACGTTGGGATTTCTTTGACTGATTAATATCATTACCAATGAGGAGTTGTATATGAACC
TGGGATCCGAGAGCATAAATAGAAGTTGGTAATAGCTATTGGATTTAGACGCAATCGTGT
TCAAATGAACATTTGGGTTTATTGGATTAAATCCCTTCTGCATCTGGATACAATTAATTT
AGAAACAAACTTGTTCCACCATCCTCTGCCTTTAGTAGGATTTCTCTTCCGTCCATCTTA
TACAAGTGTTTTCTTGCAATCTCGTGTTCTTGTTCCTCAGATGTGCCCATCAAGTATATG
TGCTTGGAGTTTATATGCTGCAAGGCTAACTCTATGCAGTAATGTAAATGAAGTGTGCAG
TGGCTCGGTGATTTAGATTGTTGGCTTAGAAAATCTGGGAGTGTAAGCAGAAGTTGTTAG
CAACAATGGAATTTCTTTGACCGATT