morexGenes - Barley RNA-seq Database

Contig contig_351344

Source Contig contig_351344

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_351344 (2395 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
		No map location

Predicted Genes from contig_351344

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_49954	1	913 bp	AK375268	Available	Available	None

CDS Structure of MLOC_49954

Contig Sequence (2395 bp)

>contig_351344 2395 assembly3_WGSMorex_rbca.fasta
CCGCCCCCCCCCCCCCCCCGGTCGGCGCCGCCCGGGCGGCCCCGCCCCGACCCCGGCGGG
GCGGCGCGCCGGGGCTGCGCGGCGAGAAGAACGCCGCGCCCAACAAGAACTCCGTCAGGG
GGTTCGAGGTCATCGACGCCATCAAGGCGGCCGTCGAGAAGGAGTGTCCCGGCGTCGTCT
CCTGCGCCGACGTCCTCGCCGTCGCCGCCGAGGAGAGCGTCGTTTTCGTAAGTATCCAAA
CATTCATAGTCATGCTTAGTTACTAGTAGTACGTACTACCCTTCAACAAAGTCTAACGCT
GTGACGTTCGTTGTGTACGTACGTACAGCTGGGTGGCCCGAGCTGGGAGGTGAAGATGGG
GCGGAGAGACTCGACGACGGCGAGCTTCACCGGCGCCGAGAACAACATCCCACCGCCCAC
GTCGGGGCTCGCAAACCTCACGTCCCTCTTCGCCGCGCAGGGGTTGTGCCAGAAGGACAT
GGTCGCGCTCTCAGGTAGTACTAACATACGTAGTACATGCAAATGCACGTACTCATTAGC
CGCCAATTAAACAACTAACAGAGTTTAAAAAAACTAACATCTCTGCATATTAACCTCTTT
TTACTGGAATTTACAGAACATAAATTCACAACATAACATCGATCAATTTCTATCCCAATC
CATCATTGAAGTACTGTTGCAGTCTTAATAACCAAGATAAAAGTAGTGATCACGTAATAT
ACATACTTTCCGTTCCTAGAGCAAGGTGAAACTATTTGACTACTTCTCCACACTGTTAAT
TTCTCGATGGAGTAGGTAAGCTTTGTATATAGCCGCAAAACAAAAACAAAAAACAGCTGG
GTTCAACCAACGGAACTGATAGCCACGTTTTAACTTCTACTCCGTCCGTTCTTAAATATA
AGTCTTTTAAAAAATTTCACTATAAACTATATACGGATGTATATAGACATATATTAGAGT
ATGGATTCATTTATTTTGTTTCGTATGTAGTTTTTAGTAAAATTTCTTAAAAACTTATAT
CTAGGATCGGAGGGAGTATATATGACCTTTTCAGGATTAAAGAAATATACTACTGTACTT
TACAGGTGATGAATTATAAAGTTGCTGACTGATTACCATTGACCTGAGCCTCTGGAAATT
TTGCTCTGTAAGACTACTAGACAACAACAACAACAAAAATTGTTCCGTGGTCACTTAAAA
TGTTAAAATACGTAGAAACAGTAATTACGAAAGTTGGTGAATGATTGCTGCCAATCGAAT
GAAAATGGGTAACCAAGCATTTTTAACGGTAACCTGACGTGACCTATCACTTGTTTCCAG
GAGCGCACACGATCGGCCTGGCACGCTGCACAAACTTCCGGGACCACATCTACAACGACA
CCAACATCGACGACGGCTTCGCCAGGAGCCGCCAGTCAGGCTGCCCTCGCACCGCCGGCT
TCGGCGACAACAACCTGGCGCCGCTGGACCTGCAGACCCCGACCGTCTTCGAGAACAACT
ACTACAAGAACCTCGTCCAGAAGAGGGCCCTCCTACACTCGGACCAGGAGCTCTTAAACG
GCGGCGCCGCCGACGCGCTGGTCCGGCAGTACGTCGGCAGCCAGAGCTCATTCTTCAAGG
ACTTCGTGGTGGGGATGGTCAAGATGGGGGACATCGGGCCGCTGACGGGGTCCAGCGGAC
AGATCAGGAAGAACTGCAGGAGGATCAACTAAGAAAAGATCCTCCACTTTGAGCGCAGAC
AATTGCGAAATCCCTAGAAATGCAGCACAATCCGTAGCAATTCGGGATGTGTTTGATCGC
GCCCAAGCTTGCAAGCAGCTTGTAGTTTCCTGTCGTTCGACTCTGTTTCTGCAATTGTCA
AACCAATGTACGTTGTGTCTGTTGGGTTAATAAAAGGCCTACCAGTCTATAGCCAGGAAT
TATAAGGTGAACTTTTTTTTCCACAACTGAAGAGCCAGAAAGACCATAAAGAGCTGCGGC
AATAATTGACTTACCACATCTATGCTAATCAATCAGAACATATCCCAAAAAGGCACATTC
CGAGAGCATCAAAATCTTCTGCTAGCTGAAACAAATATCCCAGGTAATATCTAGAGGAAA
ATGTAAGACAGTAAGGACTGTTAAATTGTGATTTAAATCCTCAGGTATTGAATTAGAAGT
AACACGGATGGGCCTTTGCGTTGGTACGGACGCGTACGAGTATAACTCGTTCACTTATCC
TTCAAAAACTCTCATTTATTGCCCCTCATATATATACTTCATATAGTCGCATCTAAATAT
GGTGTATCACCTTGTCCTTGTAATACCCCCCATCATAGTGACTACGACTTCGTGCGTCTA
TGATTTTTCCCGCAAGAGTCCTCACGTAAAATCCGTGTCTCTCGTGTCTCGTTGA