Contig Data
morexGenes
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Map Locations of contig_350004 (1030 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_350004

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_49876 1 1024 bp MLOC_49876.1 Available Available LOC_Os09g32948.1, FRAME:+3, EVALUE:2e-27, 13109.m03304 protein OsMADS8 - MADS-box family gene with MIKCc type-box, expressed





CDS Structure of MLOC_49876






Contig Sequence (1030 bp)

>contig_350004 1030 assembly3_WGSMorex_rbca.fasta
AGCTGAAGCGGATCGAGAACAAGATCAACCGCCAGGTCACCTTCGCCAAGCGCCGCAACG
GCCTGCTCAAGAAGGCCTACGAGCTCTCCGTGCTCTGCGATGCCGAGGTCGCCCTCATCA
TCTTCTCCAACCGCGGCAAGCTCTACGAGTTCTGCAGCGGCCAGAGGTATATACGCCCAC
ACACGCACGTAATTTCGAGAGCATATATAAAACACAGCAGGATCGATGCGTACGCTGGGG
TTTAGCTTTGCTAGATCTGGCCTCCTCCGGGCCGTTGGACGGTCGCTTGGGGTTTCCCGC
AGAGTTTGGTTTCCCGGGGGGCTCAGACGCAGCGGATCCGTGTCCGGAGAAGCTCGATCA
GGGGTGTGTGTGTCCGGCTTCGGCCTACCGGAAGTAATTCTTCCAGAAGTTTACTAGGGT
TTTGGTTTGGGTCGCTGCACCTTGGCTTCTCGCGTGGCGAGTTCGCCCTAGATCTGCGGG
TCGTCGTGAATCCATGGGGTCTGAGACATGGCCGGCATGAATGGGCCGGCTGGCCGGGAA
CTTTGGGTTAATTAAATCAGGGGTTTATGCCATACTTAGCTAGGACCGGCTTCGTCGATT
GGCCTCTCCCCGTAGATCTCCGAACCAACGGAGACCGTTTCCCGTTGGATCAATTTTGAC
GGTTATCTGCTGCGAGGGGACGGCATGCAGGCATCGCATCACGTAGACATCGGATGCGTC
TGGTGACCGATTGATGGATTGATTCTCAGCATCCAGTAGCTTGTTACACGGAAGATCCAG
GCAAAACGGTTACTGTATGGATGTCTTGTCGCTGGTTTGCTGCGGTTTTTCTGGGATGGT
GTCTTTTGGGTATTTGGGCTTTCGTGCGATGAGTTGTGGCTGCCTCAAATTAAGTGAGAA
CAGAACTTCATATATATTGCCTTTTTCTCTTGCTACTGGCAGGGATGAAGTTTTTAAGAT
TTTCTTGTCAACACTTACACAGGAGATATAGATTCCTAGAGAAACACAAAGAATTATCCA
AGCGTGTTTC