morexGenes - Barley RNA-seq Database

Contig contig_347833

Source Contig contig_347833

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

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Map Locations of contig_347833 (358 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
No map location	No map location	No map location

Predicted Genes from contig_347833

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_49760	1	278 bp	MLOC_49760.1	Available	Available	LOC_Os07g36465.1, FRAME:+3, EVALUE:1e-21, 13107.m24453 protein vacuolar ATP synthase subunit H, putative, expressed

CDS Structure of MLOC_49760

Contig Sequence (358 bp)

>contig_347833 358 assembly3_WGSMorex_rbca.fasta
AAGGGCAGTTCCCAAATAGCAGCCTGGATGATTTGCTTCTGTCTGAACTTGACAACATCA
AGGGGAGATTTTTAAGTTGTACTATTTATCTAATTCTCGTTTTGTATTTCAAGGTTCTCA
AGCGGGACATTCCATGGGAGACATATATGTCAACTAAGTTGATCACTTCAACATGCCTTC
AGCTTTTAAGGCGTTATGACCACAAACCAGAAAGTCAGAGAGGTCCCTTGCTTGATGAGG
TTGGTGGCATTATCATCTTCAATTATTTTTTCCTGTTGGTAAATAGCCTAGGAAAACACC
ATTGCATGATTTAGGTTGTTGTCACAATGAGTACTTAACACAAGATATGGTAATAATT