Contig Data
morexGenes
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Map Locations of contig_347607 (1164 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_347607

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_49746 1 487 bp MLOC_49746.1 Available Available LOC_Os03g17980.2, FRAME:-3, EVALUE:2e-45, 13103.m02151 protein CAMK_KIN1/SNF1/Nim1_like_AMPKh.2 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
MLOC_49745 1 631 bp None Available Available None





CDS Structure of MLOC_49746






CDS Structure of MLOC_49745






Contig Sequence (1164 bp)

>contig_347607 1164 assembly3_WGSMorex_rbca.fasta
CTCCAAACATCAACCTCAGGTCCAGCATAATATTTACCTGAGATAACCTGTGCACAAACA
CTCACTAAGCTATTAACACCGATGATGCGTGTGAAGCACGAGGATAAAGACTGAAGTAAT
AAAAATAAGTAAATACCTCTGGTGCAGCATAGTTTAGACTCCCACAACTAGTCTTCAGAA
AATGGCCATCATGCATGACATTACTTAACCCAAAGTCAGCAAGTTTCACATTATATTTGG
AATCAAGTAACAGGTTTTCTGGCTTTAGATCACGATGAACAACCATGTTTCTGTGGCAGT
GTTCAACACCACCTATAATCTGTTCAAGAATTTTTTCATAAAAACAATTGAGACAAAACC
TCAATATGCATTCAGTGAATCAGAAAGAACCCTTCAAGTTACATATTCGCCTTCAGAAGG
ATATACCATCTCTTTATGTTTTAAAAGAACAATTTAATTTAAGTACCGAGACTAAGACAA
TCAAGGCATGAAGAATAAGTGGGCATTTAAACGAAAAAACTGATTTAATTGGTGATACTA
AGATAACCAAGGCATCAGATGATGAAGAAACCCGAGTGATGCAACAACAATCAAGGCATC
AAGAACACATTAACTTGTTGATCAGCTCAACCCAAAAGACAAACCATTTACCATGGAAAG
CTTGCAGCCTAATGTAGTACAGGTCATCAGCTAAAGGATTTTTCTTTTCAGTAACTGACC
GGTCGAATCCGGCCCGTTGGTTATCAGCAAGGAATGAAACGTACTGGCCACTGTACCAGC
AACAACTTAGCGTATGCTATGTGTTAAATATAATATATTTGTACGGTAGAAGTTTTTGAA
TTGGAAATTCGTTTGAAAATTTCATGCGAAAAAATACTTATATTCAGAGATTTTCTGGAA
AACGGTTTTTTCCGGAGCCCTCCCAAAAAAAAAAGGTATCCAGAACACAAATTGTTTGCT
AAAACTTAGTCAACGAATGCAAACCGAGAAAATTGATCATGATTTGTATAGCAGGCACGC
GAGGAATCTGGACAGCGAACAATTTTCCAGTATGTCCATACATTTCACGATCAAAATAAG
AAGATCAGCGAAGTTCATTAATGAACACCTATTTTTATTCCCAAAAAAATGTGTTCCTAC
ATGCCAAGATCAGAAAAGGCACCT