Contig Data
morexGenes
Links



Map Locations of contig_346502 (5026 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_346502

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_49701 1 2625 bp MLOC_49701.1 Available Available LOC_Os06g40600.1, FRAME:-3, EVALUE:0.0, 13106.m04222 protein elongation factor, putative, expressed





CDS Structure of MLOC_49701






Contig Sequence (5026 bp)

>contig_346502 5026 assembly3_WGSMorex_rbca.fasta
AAAGTAAGATATGTTCAATCCACAAACTGGAAATACGATATGGATGAAACGAACTGATGG
TCTGGTGGAAAGTTTGTGGCACGTGAACAACTCAACATCAACAGGAAACATTTAATCGGT
GGGCTGGAGGGACTCATACAACTCTAACAACAGATGAGAGAACCCAACCAATAAGATCAA
ATTTGATACACGCCTACACAATGACAGGTCAGTAAGCAGTTTGCCATCTTACCTGCTTGT
CGGGTCCAAAAGCCCATATTGACCTTGCTGCAAGCACATCCCACTGGTATCGTTGGCGAA
AGAAGTCGGTGACTTCTTTCTGCCTTGAGTCAAGGCTGACAAGGCCATTCTCTATATCTT
CTGCCAAGCCCTTCTCTAGTGGTTCAGCTAACTGCATGTTGTCACAGACAAAGAAAGCCG
CAATTAGACCATGTGTGTTTGTTTACTATGATGAAGAAAGATGGGCACAAGAAAAGCCAA
AAACAAAATCTAACCATGGTAATTTTGTTCCTCTTGTTGGGTGTTTCAGCAAAACATTTC
ATAGAGGAAGTATCAACAACTGTTTCACAAAATGTCACAACTGGATCTGCAACCTGTGTA
CAAACAAGGCAGCAAAGTAAAAATCTGGTTCAAAAAAGAAGGAAAAATAGACCAAGTGCA
TTGCTTTATACCTTCACTTCTACCTCAGAGTAAAGCTCTCTGAGGTCCTTCATTATAGAA
TCTAGATATAGCTCACCAGTCCCAAGTATAGTGTGTTCCCCTGACTCTTCTACCTTAGTA
ATAGCAAGAGGGTAACTCTTGCTAATTTTACGTAGACCTTCCACCATTTTAGGTAGCTCA
CTCGGGTTAAGAGGCTCAGCTGCTATCTTTACAACAGGTAAGGTATTGAAGCGTAGAGGC
CTAAATATGTACACATCTTCATCCATGTTCATAGGACATATGGTTGCAGTTTTCATGATT
GATGCATCCACGCCTTCAATAAGAACCCAAGAACCAGCAGGTGCCTTACTTATTGGAACA
CGGTACCGTGCCTGATAGACCCACAACTTGGTGACCTCTTTGACAGTCATATCCTCTTCA
TCATCGGGGGAATAACCTTCTCCAAGCACCCGAACTGTCTGACCAGTCTGTATTGTGCCA
CTATAAACTCGTCCAAAGGCATCAAAGACACTACAGTCAGGCTTAGGATACAGTTTTGTA
ACATTGACCATAAGAGGACCATGGGAATCACATTTCTTCATTGCATCCACAATGGAGGAA
TCTTGTTGACCGGTGTATATGTGTTCTATTTTCCTTGCAGCACCATCCTTAACATTGGGG
ATGTTTTTCACTAGCATGTCGGTAAAACCAGTAGCAGTGCCAAAAATTGAGCGGCAAGCA
AGTCTCAGCAAAGGCCTAACATTAAGCTTATAAGCTGCATTGCTCAGTGTCACACCCAAG
TCAGCTAGAGTTACTTCAAGAATTCTCTGTTGCTCTCCAACAACCTGACTGTAGATTTTA
TACAGAGGCTCAAGGATGAACTCAATGAATGACCTATTAGCTCCTGCTGCAGGCGGCTTC
TTTTTGAAGGTTCTAGAGTTATGGTCATAATACAAATCTCCCCATAGACGAGATGCAAAT
TTCTCATGGTCAAACTGAATACCATGAATCTTCAAATAAAGATGCGCAAAAGATTGCAAG
GTAAAAGACCAGCCAGCAGAACCACTCGCAAAGCAAACATTTCCAGCAGCAGGGTCTACC
AGTTGAGTGCCACCTACTGTGGTAGAACAAGACGAGATTAGATCATTGATTGTGTCCAGT
GTATGTCGTAGCTTAAAATACGCATCATTTGGGGGTAGCTTTAGCTCTGTTATCAGTCTG
TCGACCTGTAAAACCACAACACGAAAGCATATGTCAGCTTCAGCTTGGAACTGAATTGTA
TTAGAAAAAAGTGGAACCAAGCAAAATGTACCTTGTTAATCACAACAACGATGGGAAGTC
TTTCTTGGATTGCATGACGAATCGCCCTCTCAGTGTTTACCTACTCATCAATGGAGATAA
ATAAATATAAATATATATAGATGTTCCAATAAAAAGGAAAATTAACTTCCGCAATTTAAT
TCTGGGAATGCTAGCATGTATGCATGCAGCCAAGCTAAACCTGTTATTGGCAAAAGGAAA
AAAACTCAACACCACCAACTTATATTCTGCTTCTAGTGCATGTTGCAGATTTGCAGTTTT
TCATTTGAGTGAAAACAGTAGTGAAGGTCATTAACATGCAGCTTAAGGATATAAGGTCTT
TTATATAAGCCCACTGTCCACCTAGTTTGAGCTAATACAAGACGAACAAGCTGACAAATA
GATGTTTTGCTTGCCAGGCGTGTTGCTATGTTCTAATTTTGTGATAATATATGCTCCATT
TTTAAGACAACACAACAGACACAATACAAAACAATGCTGATAATTTCAAGAAACAACACA
TTTTCAACATGCTACCTAGTGCAATGCTGATAATTTCAAGAAAACAACACATATTCAACA
TGCTACCTAGAGTCAACTCTACTTATTTCTCAATGCCTTTGTCATCAGCACATGCAGCTG
TTGTTGTCCCAAATGCAGCACCAACAAACCACTTATAAGTTCCAACTGAATAAAAGGTTA
AGCCAATGTTCAAAAAAGCGGAAAGCGTAAGCGAAGCGGAAGGCCACAGCTTAGAGCAAT
GGGTGCTTAAGCACAGCTTAACCGCGCTTAAGCGTTTTTTGAAATTGGCTAGAATTTGAC
ATATTTTGAATAATAAACACAGGAAAATAGGAAACATGGCACATGTGTAATTGAATAGTA
TCTAAAATACAGTTCACACCATAGCGAATACGCATCAGGTTCACATGGCAAGCAAAATAA
CAACTAAAATGCAGTTCAGTTCAAATAGTCATAGCCTAATAGAGATCATGTGGCCATAAT
TTTGCCAGCGTATGAAGGAAATAGTTCCCAAAGATAGCATAACAATAAGATAAATGGGAT
ATTGCCATTATTGCACAAGCAGACAAGCAAAATTAGTTCAAAAACAGTCAAGTCTGGCCA
AATTAAAAAAAAGCTTAATCTACCGCTTAGGGCAAAAGCGAAGCGCTTTGCCATCTCTCA
GCGCTTAAGAACGCTTTCTTGAAAACAGGGTTAAGCTCACATAAACCAAGTTAAACTAAA
GCATTACCTATTTGCCTTCAGACTTGTTAGATGCAGGATAAATATCGCATGTTAAAACAT
GCAGATCTCCTGTTCTTATATAGTGCTAATATATTTGTAGCTTCAGTCTCCTGTTCTTAG
GTGCCAGGCGACGACCAAACCAGCAGCTGGTAATTTACTCATTATCATGCCCTAAATTAA
TGTCTATACGCCAAATACACCCCTGAGGGTCAAAATTGCACAACTGCCTAGGCTCTTAAG
TGTCCCTTAGGCACTAGGCGAAGACCAACCGCCATGCATACGCCTAGCACTATTTTGAAC
CAGCCATGTCATTCATTGTATTCTTCAGATGCTTGGGTAAGATGTGGTTCTTGTAATACT
GATACACATATGTTTTATCCACCTCCAACAAGAAAAAGGGAAATAACTCATTCTTGAAAA
GAAATCCAATGAACTTGTGAAGCTGTAAAGATGTATCCCTAGCAAGTCTCTTGTCAAAAT
GAATTATGATGAACAACCCATATCTCACATTCAGACAGATGCAATTGCCATAACCTTATC
TAACATTTAAAAAACGTCACAGCACTAATTCCAGTTTAATACTCATTTAAAAAAACGTCA
TAACCTTATTTAACATTCAGTACTACCTACTTCGATATAGCAAACAGAGTTCAATCCCAG
TTGAGCAGAGATGTATAAAGCAATTGGATCAGTGAATTACCATGACGCCCTCAGCAGCAT
CGACAACAAGCACAGCCCCATCCGCTAGCCTGAGCGCAGCAGTCATCTCGTCTGAAAAAT
TGACATGCCCAGGCGTGTCCATGATATTGCAGAGATAGGACTTGCCATTCCCCGACTCGA
GCACGAGTGACATGGGCACAGCCTTGATGGAGACCCTGCGCTCCTGCTCGTCGACCCGGG
TGTCTGTGAACCGGATGTGGCGCTCGCCCTCGGAGTCAAATGTGTCCACCTCGTGGGTCT
GCTCCACGAGCATGTCCATGAACACCGTCTTCCCGTGCTGCAGGTGGCCCACGAGCGCCA
CATTGCGGACCAGCAGCGGGTTGGAGGCGAGGCCGAGGATGAAATCGGTGGAGGCGTAGG
TGGAGGTCGCGCCGGCGCGGGTGCCGACCTCGAACTTGACGACGCGGGGCGGCGCGACGA
TGGGCTTCTCGAGCGCCTGCTCGTCCTCGTCCATGACGAGCGCCTCGACGCCCGGGCCGT
AGACCTCCTCGGCGGTGGGGTAGTACTTCTTGTCCTCGGCGAGGACGACGGCGTTCTGGG
CGGCGTCGGCGTAGTCGTCGTCGTCGACGTCCATGAGGGCGGCGGGGCGGCGGGAGCCGG
GGGAGCCGGACGGGGAGCGCGCCGGGGAGGGGGAGCGGGACTGCGAGGGGGACGGGGAGG
CGTCGGCGTCCGAGTCATCGGCGTCGGAGTCGGCGAGCGCCGGGCCGATGTAGTTGCCGA
ACTCGTCGTAGAGGCTGTCGTCCATGGCGGCGGGATCGGGGGCGGGGGCGGGCTAGGGTT
TTGGGGCCGCCGGAAGGAGGCGGGGGAGGTTTGGGATTTGGGGTGAGAGGGAAGAGGAGG
GAGGCGGTACAGCACAACGGGGTAAAGTGAGGTCCAAACCGGCATACGCGAGGGCGAGGG
TCCGGTCGTCTTTTGGATCGGGATCATGCCGCTGGGCGCAGGAGACAGGAGCGAGGAGCG
GTGAAAACTGCGGTAATCTTCTACTCCCTCCGTTCTTAAGTCTTTTTAAAGATTTCACTA
ATGGACTACATANNNNNNNNNNTAGACATACTTTAAAGTGTAGATTTACTCATTTTGCTC
TGTATGTAGACCCCTAGTGACATCTTTTAAAAGACTTATATTTAGG