morexGenes - Barley RNA-seq Database

Contig contig_344232

Source Contig contig_344232

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_344232 (410 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
No map location	No map location

Predicted Genes from contig_344232

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_49570	1	392 bp	MLOC_49570.1	Available	Available	LOC_Os02g58300.1, FRAME:+2, EVALUE:8e-44, 13102.m06753 protein expressed protein

CDS Structure of MLOC_49570

Contig Sequence (410 bp)

>contig_344232 410 assembly3_WGSMorex_rbca.fasta
CTCTCAGCGCTCCTCGCCGCCTACTATGACGCCGGCCAGCCCGCCCGCGCCATCCAGGCC
TTCCGCGACCTCTCAGCCGAGCTCTCCATCGAGCCGGGCGTCGTATCCCACAACGTGCTC
CTCAAGTGCATGGTTGCCACGGGGGACGTCGCCGGCGCCCGCCAGGTGTTCGACGGAATG
ATCGACAAGGCTGGGCTGCAGCTGGACATAGTCTCCTGCAACGAGATGCTCAAAGGGTAC
CTCAAGACAGGCGACTACGCGGCGTTTGACCTGCTGCTCAAGGAGGTCACCGGTGGCAAG
AGGCGGCTCAAGCCCAATGTCACCACCTACAAGCTCCGTATGTCCGGCCTGTGCGCCAAG
GGCAGGAGCTTCGAGGCAGAGGAGCTGCTGGAGGCCATGGCCGCCAATGG