Contig Data
morexGenes
Links



Map Locations of contig_344080 (2370 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_344080

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_49567 1 1614 bp MLOC_49567.1 Available Available LOC_Os09g08620.1, FRAME:-3, EVALUE:5e-109, 13109.m00725 protein OsFBX309 - F-box domain containing protein, expressed





CDS Structure of MLOC_49567






Contig Sequence (2370 bp)

>contig_344080 2370 assembly3_WGSMorex_rbca.fasta
GCGAGGCGGGTGGTCGGTTGTGGTGCTAGCTTGACGCAGGCTCAGTGCTTTTCTCCTACA
ATGCTCGTCAACGGAGTCGGAATTGCCTGGTAGTTGGCGCGGGCGGTTGACTGTTTGGCA
ATGGCCGACGTGGGCCTCGGCGTTTGCTTGCGGTGAGGACTATATTGATGGTCATCGATG
GTGGAGTCGGAGTCACCCTTGTGTAGGTGTGATGACGATGACACCGGGTTGCAGCCTCGG
CGGTGTTCTCTCCTCGATGACGTGTGCGTTCCTATATGGGTTGCCAGGTCGCCCTGTGTG
TCCTGTGTGGACGTGTTGTAACGGTGTTCGCCCGGTTTTCCGTTAATTAGCCGGGCAATT
CTCTTCTTCTTAATTAATGTGATGAGGACTCCGTATCAAAAAAAAAATCATATGAACACT
AGTAGTATCCCTTGAGGTTTCTTTGGCCTTCTAATGGTCAATTCAAGAAAAGTAACTCGA
AAGCACAAGAGGTGTCCTTGTTAACCATAAAGATTAATGGAAGCGGGAAATTGATTGTGC
CACTACAGAACTTCAGAGTAAATATGACCCAACCCACCGCCAAAAAAGATTCCAATAAAA
AGAGAAATGTGCTACAGGAGCAAAGTCCCAGGAAAGGCGTGGCCTTTTTTCAAATTGCTT
CCAAGAAAAGGTTAAAGAAAGAAAAGAACATAAAGGTAAATTCAAGATGAGGCAGTTCAT
GGTTCCAGCTATTTTAACAGCAATAGTATTTGTTTCCTTCATTCTATCAGATAAGGACCA
TGACCAAAAAACAATTTGAGGAATCACCATGAAAATTACAGGTGAAAATATTTGGTTTTC
TTCAAGGAAACTAACATGCAGTGAATTCCTAGAAATTTTTGTATAAAATCTACCTTCAAC
ATCAATTCAATTTAGCAACCACCCTTTGAATTCTGAAGTTACGCTAAAAAGATCTATGAC
AACTTAAAACAAGAACGGGTGGAATGTCTGCTGAAACTCAATGCAATTCAAGTTAAATTT
GCAGAGGTAAACAAATGAACATTATTTTGGCATTGGTGTGAACTTTACTTCCCGCGTGCT
AAATAATCATGTGCCACGGAAGTCACTTCAAGGGACCATAGTTGAAGGGATATAGTGCCA
TGATGCCATCAAACTTCATCCGTAAAGTGCTTTCAAGTTCATGTAAAGATGAATTGCTAA
TTGCCGGCAAGCTTTGGGAAGCAATCAGAACAAGATGATCAAAGCATGTGATTAGCTCTA
CTACCACCAGAACATATTATCTCTAACCAACTAGAAGTAAGGAAGACAATGTGGTAAGAT
AAGCACTGCTTTGGAATAGTGACTTCTCATTCCCTGCCGCGTGGGAAGAAATCTTTAGAA
CACTACAGATCCTATTACTAATGGATACGCATACGCTTGTGCTTACAACGCTATTAGCCA
AGTAAAGTTGATGCATTTATACACATGCAACAAACTAGTTGAACCTTAACGCAAACACAT
ACGAGCGGATAAGCATTTTTATCAAGCAATATCACTGGAAAAAACGACATGGAGAGGGAA
GGAAGATCTTACAAATGGCCAAATTCGTCAAGCCATTACGCTTCAGCAAGGAAGGCAGGC
GGCCATGCCAGGGAGTAGGCGAAGATGGGGTCCCCGTACTCCTTGCCATCTTCCATCGCC
AGGCGCTCCAGCTTGCAAGTCTTGAGATCGAACGAGTAGCGGCCACAGCCCAGCATCTGG
ATGAAGAGCTTCCCTGTGCGCCCGGCGTCCATGTCGGTGAGCATGATGCTCGCCATCCTG
GCCCTCCTGTCCCTGGGCAAGCCCGGCACTGCGTCGTACACTTTGCTAAGGTTCATCTCC
CTCTCAAGATGCCACCCATTGTCGCTCCACCTGGTCTCCCGACGCACCCAGAGTTGCATC
ATCTGGTCCTCCACGGTCGCGATGCAGAGCTGCCCGTCCTCCGGCATCTCCCCGACGCGG
TACTTGCTGAAGCGGTCCGACAGTGCAGCCGGCGCCAGCATGTAAGAGAAGCGCAGTGTG
GAAGGGTCCAGCACGAGCACGCGACCGGAGTTGCAGAGGTGCCAGTAGAGCTTCCCGGCG
GCGTGCACGCAGCGTCGCTCGAGGCACCGGAGCTCGAAATCGACCTCGACGTCCACGGCC
CGCGGGAGCGCGCGCCAGCGGCACCGTCCATCATCGACGGACGCGACCCAGGCGCGCGGG
CGCCCGTCGTCGATGGCAAAGCAGACGACCTCGAAGCAGAGCTTGCTCGGGTGCGCGCGG
GAGAGAAGCGCGGAGCCGATGTAGACCCTGGAGCGGCGCCAGAGACGGTCATCGGGCACG
GTGCAGCGCGGCGGCGGCGGGAGGAGCGCG