Contig Data
morexGenes
Links



Map Locations of contig_342448 (2393 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_342448

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_49483 3 1674 bp MLOC_49483.1 Available Available LOC_Os02g10390.1, FRAME:-3, EVALUE:1e-143, 13102.m01154 protein chlorophyll A-B binding protein, putative, expressed





CDS Structure of MLOC_49483






Contig Sequence (2393 bp)

>contig_342448 2393 assembly3_WGSMorex_rbca.fasta
TGGATACCCGGAAAGCACCCCCCCCCTCTTTCATCTTCATTCCATCGGTATGTCACTTGA
AGCTATATTTATTCATCACATAATATGTGTTTTGCTTGGAGTGTCGTGTGTTAGAGTTTG
TTTTTGTTTTTGTTTTCACAATCATTGTTTGCTGGACACACCTATTTGGAAGAGACACAT
ATTCATCATGATTTATTAAAATACTTTATATGCTTCATTTATATCTTTTAAGCTAAATAG
TTGCTCTAGTGCTTCACGTATATCTCATGATTTATTAAAATACTTTATATGCTTCATTTA
TATCTTTTAAGCTAAATAGTTGCTCTAGTGCTTCACGTATATCTTTCTAAGTACGGTGAC
GTGTAGATTTTATAAAAATAACTATACTTTCGTTCTTTATTTATATTTGTTTGAATGTCT
AATAGGGCAACGGTAATTTGCATGGGTGATCAGATGAGGAGGGGGGAGGGGGTAGAAAAA
GCTAGCAGATGCTGCTGAACAAGTGAAGATGGTGAGAGATGCAATGCACTAATTTTCATA
GCACGATATAAATATTACAAGCATGCACGCAGCACGCGTACAAATTTACATTTTACACCC
ACCCTCGCATATATACCGCTCGCGCGCTCACGTTTCCCACGACGACAGACGGGTACCATG
CACAGGACGACGATGCTCGGATTTCGCCTAGTGGAACTTGAGGCTGGTGAGGATGTTGTT
GTTGACGGGGTCGGAGAGGTGGTCGAGGAGGTTCTGGAAGGGCCCGACGCCGGTGAAGAT
GGCCTGCAGCGACATGCCGAGGAAGGCGAGCATGGCGAGACGGCCGTTCTTGATCTCCTT
GAGCTTGAGCTCCTTCATCTCCTTCTCGCTCTTGGTGCCGAACCCGAGTGGGTTGAAGAT
GGGCCCGCCGGGGTAGGCGGGGTCGCCGGAGCCGCCGAGGTACTTCTCGAGACCCAGGAA
GTACTGCTTCCCCATGGAACCCGGGTTGTACCAGTCCTGGAGCCGCCGGTGCTCTGCGAA
GCCGATCAGTGCCATCTCGAACACGAAGAGCGTGTAGGGGTCGGCCCAGTACTGGTAGGT
GCCTGCCGGCGGGATGGCGCCCGCCTGGAACCACGGGATCGCCGTCTCCGGGGGCACCAG
ACCCACCTTGCCCAGGGCCTCCGGGGCGATCATGCCCACCACCCCCATCATCGCCGTCCG
GCCGTTGAAGATCTCGCCGTAGGCCAGCCACCTGGGCTCGATGAACCCGCCGGTGCCCTC
CGGGTCGGACAGCCCCAAGGGGTCGAAGCCAAAGTCACCAGGCAGCCTGCAAGGCACAAA
ACCCAACACCTTCTAAGTCAGCTTCTCTTTGCCACACTGCCAACATACATACACCAGGTG
TAATATGTTGCGCCGCGACTTACGTGCCGTCGAGGTAGGTGAGGGACTGCTTGGACGCGA
ACCACAGCTGCCTGTTGTCATTTTGCTGAAAGAGAAGAACAAAAGAGAAAGTCAGTAGCC
ACTCCAGCCAGCTCTAATCAGATCAGAAGAAAACATGCAGCATGGCTAGAGTCTGAACGG
ACCTTGGCAGGGGGGCTGGACGATGCCCTGACGACGAAGGGGGACTTCCGGGAGGAAGAC
GACCTGGAGAAGGAAGACTGCAGAGGCCTACCCAGCAGCTGCCTCCCAGAGAGAAGACCC
TGGGCCGCCATTGTTCCTGCAAGCTCCTCCTCCTGCTGCTCCGAGAGATGAGGCAGACGC
GGTGTGTGTGGTAGAGACTGAGATGAAAGTGTGTGCTCCAAAACTCACCCACTGCTACAA
AAGGAGAGAGGAACGTGCGCCTGACGGCCTGAGGCTGGGCGGGGGTGGGGCCAGGGAAAT
CTTATTCCGATGTGAGGTGGAGCCTCAGCGGATGAGGGCATCTGTGGACCCAGTAGAAGC
CCGCCATGTGGAGGGTATGCTGGGATAAGGGGGCTGCCACCTGGCTTCTCAGCAGCTGAG
GCTGCGTCCATACCTGCATTCCCTTGGCTCAGATTTTCCACCACCTTGTGGACAGCACAG
ACAGTTGCAATTCTTGTGCCTACCTAGAGTATGCATTCCGTGAGATATGATGAGATATCA
TGGTTGCCCCTATGAGCCTATCATGTATCACCATCTGGATAAGGGGATCTTTGGGATTAA
ATCATCAAATTTCTTCAATTAATACAAATATATACTTTGGCAGTTAATATTGTGTATGGT
GATACGAGACCAAACTGAATTTTCACAAGGTAAAAACAACTTGATCTCCAATTCTCCACA
AAAACAATACAATCACCAAGCTGCCAGTCAGTTACATTCTGATGAAAAGATAAATATGTT
GGATGAGGTTTGTACTTGTATGGTGCCTACTCGGCATTTTACGAGTTATGAAA