Contig Data
morexGenes
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Map Locations of contig_342122 (6078 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_342122

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_49468 1 787 bp AK359887 Available Available None
MLOC_49467 2 958 bp AK359887 Not available Available None
MLOC_49469 1 188 bp MLOC_49469.1 Available Available None





CDS Structure of MLOC_49468






CDS Structure of MLOC_49467






CDS Structure of MLOC_49469






Contig Sequence (6078 bp)

>contig_342122 6078 assembly3_WGSMorex_rbca.fasta
CGGTGGGGGCCGCGCCCGGCGGGGGGGCGTCAGGGGTGGGCGGCCGGGTGCTCGGCGGGG
CGCCACCGGCGCCAGAACTGTTGCCACCGGCGGAGGATGCCATCGTCGGGGCGAGAGGTT
GGAGGGAGAGGAGTAGCGGGGCGACGAGGGAGAGGAGAGGAGAGGAGAGCGACGCGTCTG
GGGGACGTGCCCGGGGACGTCGTCTTTATATAGACTGTCGGGGGAAGGGGAGGCGACGGG
GTGGTTGGGCGGCGTTGCTCCCCCGAAGTAAACACGTTGTCTCGGGGAGGCGACGGGCCT
CGGGAGACGGCGGCGTCAGGCGTTAATGCGCGGCCTCGAGAGATGGCCGGATCGACGGTC
AATAGGCGACGACGTCAGGCATTAATGCGTCGGGCCTCGGGAGAGGGCGGACCGTCGGTC
AATAGGCGGCGTCGTCAGGCGTTAATGCGTCGGGCCTCGGGAGACAGCGAATTGACGATG
CAGGCGGGATTAATGGAGGCGACCTCGAGAGACGGCGAACTGACGACGTAGACGGGATTA
ATGGCAGCGGCCTCGGGAACCGACGATCAATCTGGAACCGGCGCAAAGGGGTCTGATTTG
ACCGTGGTCAGGGCGACGTGGGCTGACGTGGAGACGACACGTCACACTGACAGACGCGGG
TACGACGCGTACATCGGAACGGAGGAAAGACCTTCCTGCCCTTTTTTACGAAAGGGTATC
GTTCAATCCGTCGTTGTGCCCGGGGATTGTACTGAAGAAGAAGTGTTAAAAGTATCAACA
CAAGTTACATGACAACTTCACATACACTTCTCCATCCGAAGCAAAACCGGAACACATGCT
CTGATGCAGTTCACTGCCACTTACATGTTGCCGAGTTTTAATACTTTACAGGTGAGCACA
GGAAGATGTAGATCATGTTAATTAACCATGGACCCTGTGCTCATTTAGAGACTCTCGAGG
AGCATGATGCATCATTATGTTTGTAAAGATAGGCAGAGATGAATCCTTTTTCGACAAATT
CAGTAGACAAGCTTGGGCTCAAATTCGGCAAAATCAACGGAGCCAGACTCGATTGGGGGC
ATGAGGTACGCAGCGATGATCTCAGACACTAGTTGGGCAATAAGAGGAACCCTCTTCAGG
TTCTTCACCAGGGGCAAGTCGTTGGACTCTCCTATAGAAATGATCTTCAGGTTGATATCT
ACCATCCTGTCTAACTTCCTCTTGAATTCAGGGTTCTCAACATCCGGTACAGCAGGGAAG
ATCCTCGCCGTTGTGCGGTTGGTCTGCAGAGATATGCACCAACAGTATCATCAGTAGAGG
TCTTGATTTAAGTCGAAGCTTAAATATTGTCATAAGCATTTAAATAAACTATAATGCTTC
ATAGGGTTCATGTTTATTGTACTACGAAAGGTCATTATTGTCATGTTGAGCAGTTCTTCA
GAAACTGCCTACACTCAGTGAAGCAACCAGGACATGCATGTGTTAATCGAGTATACAAAC
AGGAAAAGTCACTTCATTTTACCTCATAGATGACATGCATGTCGAATTCTTTGGTGTTGA
GACCGATTCCTTCATAGAAGGCACTACGTTGGCAGTCATTCAGGTACATGGTTATATACA
CCTGTGAAGTGTCGTCCCATTACACGCAGCTGTTAGAAAGAGGGACAGTTGCAAACTCCC
AGGGTTAATTAATTAGCCCATCCAAGAAAATGAAGGGATTAGCTTGCTTTACCGAGAGGC
AGAAGAAGCGTGACCAGAGCTTGGCCTTCCAGTCATTGAGGAACTGCGGCTGCGCCTTTA
GCAGCGCAGAGAAGAAATCACCGTGCCGGTTCTCGTCCTGGCACCAGTTCTCGAAGTACT
TGAAGATGGGGTACACCTGGTACTCCGGGTTGGCCTTGAGGTGCCTGAAGATGGTGATGT
ACCTCCAGTAGCCGATCTTCTCGGACAGGTACGTGGCGTAGAAGATGAACTTTGGCTTGA
AGAAGGTGTACTTCCTAGCCTTGGTCAAGAACCCGAGGTCCAGAGCCAGGTTGAAGTCGG
ATAGCCCCTTGTTCAAGAACCTACACAGCACGAATCATGTTATTTGTATGAATAACACGA
ATCATGTCGAGAGCTAAACTACAGTAGTTAATAATTTAATTCTTGCGGAACTGAGTCATA
GTGCATTTGAAATTTTACAGTAGTTAATAGCTTAAACTTTTTACATGAGAGAAGAAGGCA
TTTCTGGTCATAGTCAGTGCATTTGAAATTTGGCTTCTGGTTACGCCCTATCAAATTGTA
TTGTATTGTATTGATGGGAATAAGATCGCAAGTACATACCCAGCGTGCCGGGCCTCGTCC
CTGGACATGAGCGAGAAGATCTCAGCCACCACGGGGTTAGTTTTCTGAAAAGGAAACGCG
GCATCAGCGCATACCCACCAGCTGCTCGACGAAATGCCTACATGCAAAAAAGCAGAGAAG
AAGAAGAGGTACACGAACCTTGAGCCTGCGACCGAGCTCCTTGTAGAGGAGGAACCCGGA
GAACTCGGCGGTGCAGGAGCGCTCGAGGAACTCGACGAAGATCTGGCGGAGCGGGCCCTG
CATCTTGTCAGCGGCCTCCTTGAACTCGGGGTTGCGGATGAAGTGGGTCTGGTTGTAGTC
CGTCTTGAACTCCTGCAGCAGCGCGTCGAACTCGTCCTGGTTGAGCTGCTTGTTAATCTC
GGCGTTGAAGAGCTGCTCCATCTCGTCGAAGTCCGTGGTGTAGAACCGCGGCGTGAGCAG
AGACTCGTTGACCTCCGTCTTGCCCCGCTTCTTCGGTGAGCCGGGCTTCGCGGCGGGCGC
GGGCGGCGCCGCGGCGGCGGCCCTCACGCGGAAGCGGACGGCGCCGGAAGAGGCCCGGCG
TGCGGGGACAACCGGGAGGTGGGAGGCCGTTTTGGCGGCGATGCCGTAGTGGTGCATTGC
GGGGTTGAGGAGGGAGAGCTCCATGGCGGACGCCATCTTCCGAGGAGCGTGAGTGACAGA
CAGCGCGGAACGGGAGCGAAGAGTTTGGGGGAACGGAGAGGGAGCGGCGTATATGCAGGA
CAGCAGTTGCTGCTGAGAGCAGACATGTACTGTGAGATAGGGTGTGGTGCGATAAGGCGG
CGATGAGGTGTAATCTTCGTCTTCAAATGGGCGCGCGCCATGTGTAGAGGAGGCCAATCT
AACCACACGCCCATCTCAGCTCTTTTTCATCAATTCTCTTTATTAATTTCCTTCTCCTTC
TTCTTGCAAGGTCCTTTTGCTTTGCTTATTGTTGTTTCTTATCATTGATTATTTACACAA
AAGCGAGAGGGCACGTGATTAAACTAGAGTAAAATCCACACAAGAACAAAGCAACATGTA
GTAAATTATGACTTGTAGCCATGGTTTGAGATGAAAATCGACTAGTTATATGCAGTCAAT
TTCTTGTTAACCAACTGAATATACATTCTCGTGACCTAGATATAGTGTAACATCTTGATG
GCTAAAAGGTGATGCTATTTAGGTTTCATACAAGGAAAGGAAGTATGTTTTTACTTGTAG
TCGAAACACAAGGCACTTAGCTGACTTTAGAACAAACGATATGAATGTAATTTTTATTAT
TTCTGGTGTTCGTTAAACTGTCATGATTGAAGATGAATAGATCAAAAGTTTTCTCGCACA
AAAGAAGACGTCAGAACAAACGAAGGTACATAATTTGTAGTCACTCGGGTAATATAATTG
AAAACAAGAGGACCATAGTCATACAAACTTTTTATGGAAAAATCGATAACTATCTTTTTG
GCTTGTCAATATATGAGAAGGAAAATTAGTGGTGGTGGTGATGGTGTTGCTTTCCTCCTT
CCTTCAAAACAATTGTGAATATTGGCCACGATGGAGACAAGTGTGTGGCCATGAATTATC
CCTAGTGGACTATACTTGACGAAAAGAAATGAACAAAAATCTCATTTGACATGGTCAAAA
AATAAATGCGAAAAGCCTCATTTAGACCACATATTTATTTTCTTTCAATGAAAAACAATA
GGGAAGGTCCTTACGTTGTGGTTTGCACCATGTAGGTTGTTAGACAATATTGGCATTGTG
TTGCCTACTGAGAGCACATTCACTTCCTTGGTGGTTTTGATAATTCATGTCAAAATACAT
GTTGTTGGACAAATATTTTCCTTGAGTATATTTTAGGACGAGTTCAACCTAGGAAAGCCC
TTCGATTGAGATGTGGAATGCCAATATTATTAAGAGGGGGTGAGGTTATGGTGATGGTCT
AACTGCTCAAGTGCTTAGAGATATTGCTCCAAAACCCTCAACCACAGTGTAACATTCATC
TATGTCCAAAACCATAAAGTCCATCTTGGTCCTACCAAAACACATACGTCCGGACTCACC
GAGATACACTTGACATAACCACCCCTAAACCTAGAGGCTCGATCTCACCGATTTAGCCCT
TTGGTCCCACAGAAGAGCATTTTCGAACCACCTGTTACAAATTGAAATCAACTCGGATTT
TTTAATCAATTTCAGTTGGTGACACCAAAGTGTGGAAGGTGCTTAGGTCAACTTTGCTTA
GTGCCACCGTGAGGTTTCATTCGGTCTCACCGAAAAACCTTAAATTCAAACCTTTCGAAC
AGACTAGTCTCACCGGTTACTTTCATCCGGCCCCATCGAGTAGTGTATAAATGTGTGCAA
CGGTTGGAGATTTGGTGCTGGTATATATACCTCACCCATTCCGCCATCTCTTAGGGAGCA
ACCAGTTCAAAGTTTACACTTCCCATATCCATTTTCTAAGATAAAACCACCTACACTTGT
GTTGAGAGATCAAGAGGATTTCACTCCAACCTTTGATCATTGATCTCTAGCCTCCCGAAG
TTTCTTCCCATTCCAATCCCTCTCCTACGACATAGCCAAAATCTGTGAGAGAGTGTTTGT
GTGTTGAGGAGACTATCCTTTGAAGCACAAGAGCAATAATTTCATCATCATCAACGACAA
GTATTATCTTTTGGAGAATGGTGTCTTATAGATTGGTTAGGTACCACTTGGGAGCTTCCT
ATGCTTGTGAAGTGAACCAAGGAGTTTGTAAGGGCGAGGAGATCGCCTACTTCGTGAAGT
TCTACCCTGATAGAGGCTATTACTTTGTGGGTGTAATCCGTGATGGAATAGACAAGGTTG
CTTCTTTGTGGATCCATCAAGGTGGAGCCCTTCGTGGACTCGCACACTCCTTACCCCCTA
GGAATTGAAGTCTCCATATACGTAAATTTATGATAGCACAACATATCGTAAACCACGGGG
TGGGAGGATCATGTCACCCTTCGTTTGCTATATCCCATAAACTCTACTCCCTATATTCTT
GCACTTGCATGTTGTTTACATTCTACTAGCTATACATTTATGAATGTGTAGGGTGTATTG
CTTGCTATCTAATTTTTGTAAAATCTTCCTAAGTTTCAAGAGAACTAAAAATTTCACTTT
TCCCTTGATAGAGTCTATCCACCCTCCTCTAGACCTACCCTTACAACCCCACACCTATTT
ATGTGCTTAGATGGATATCGATAAATCAAGACAAACAATATAACAGATGACTACCAGCAC
TCGAAAAGCAAAAGGAAAGTAATATGGAAGTTTATATATGGTGAATATACAGAAAACATT
TTCTTGTCAAGCAATTTGGGTCTACAACCACACTCATAAATTGGAGTAGGACTGTTTGGG
TTTGTACACAAGGAAATGAAGTTGATTAGCCTCCCAACAATCACTAATATGAGACATAGA
ATTTTCATGATAGCCTTCATTGGAGAAGAAGAAGAAAATAACTAAGATATCATAATCGAA
ATATCTGAAGATCGAAGCAAAAAATCTTGCCATAGAGGGGGAGTTCATCCTAAAGTTGTG
ATGCTTAGATCTAGATCCTTAACTCTTGGCGAACATTGCATGGGAAACAAAACAATCCTA
CGCACATACAAGATCTATCNNNNNNNNNNNNNNNNNNNNNGAGGAGAGATCGGATCCACA
TACCCGTATAGATCGCTAAGAGGGAAGCATATATTAAGAAACGCGGTTGATAAAGTCGAA
CGTCTTCGCGATCCAAAT