Contig Data
morexGenes
Links



Map Locations of contig_341219 (4469 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_341219

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_49413 3 2208 bp AK364287 Available Available None





CDS Structure of MLOC_49413






Contig Sequence (4469 bp)

>contig_341219 4469 assembly3_WGSMorex_rbca.fasta
ACACTTCCGATTTTCATCTGTTGTTTTCCCATAATACATAATTACATAGTGCATTACAGC
ATGCACGCGGATCANAGATACTCGTTCTCGGTCGTAGTTGATTATTGCATATAACCAATG
TCTAGAAACCGGTTTACACCCATAGTTTATAACCGCTAATAACCAAACCGTTTAAACCTA
TAACCAACTATATCCAAACTGGTTTCTTCACATACCCACACCAAAACCAAACTAATAAAA
TCTCAACCCAATAAAACCTGAACCAATCAAACCCAAAGTAAGAACCGAACCGTTACACCC
AGTTTTTTCGTAACCATTCCCACGTTTAGTCGCATCATTGTTGTGTCGTGAAAGCAACCG
AGCCGTCATCGCAGCTCCGGCGACGTCGCAGCATCATTATGTCGTTGAAGCACTTCGTCG
TCGAGCATCACAACTTGCAACTTGGAAGCAATCGGGCTGCGTTGCACATCACTGGACGGC
TCATAGCATAGCAGCCCTCACTGGCAATAGTATCGTCAGTCGTTGCCGCTTGCAGCAACG
CTGCTTCCCGCCGCAGCAGCCACTGGAGACTGGCCTGCAAATGGAAATGGCAGGGGAGTC
ACGGGAGCAATACACATGTGATCGTGCTGCTAAGGAGGAGTAGGGTGACGATATTCAAAA
ACGAAATGGAGATGAAAGCCCATAAGAAGACGGGGTGGGTGAGAAGATAAGGTTGAAAAC
CAATAGTAGTTCGTGGTCCCACTGACACGCATTAGAGGAGGCTGCTGGGTTTTTTGTTTA
CAGTGGGTTGTAAGAAATCAGTGTCCCAATGGAAACCCAATAAATTATTATTTTAACTCA
AAACAAAACAGAGTATGGCAGCTGTAGATCTTCATTGATGTATGAATTTGTATATTTCCT
TTACATATCGTGATTGTTATTCTGACAATATTAGGCATAGAGTTTGAACTCTTACTCGAG
AAACTCAAATGATTATATCATCTCGAGGACTTCTACTTAAAAAATAGCAGTGGCACTTCG
CACGGTAAGAGATCCAAGTGAGATGAAGGGTAAGAGATCCAAGTGAGATGAAGAGGCAAC
ATAAAGAAACTGGATAATAGTGGCAGGGCTTAACAACAAACGCACGCGATATAAGCTTTG
AGTTTTCAATTCTCATGTGATTTGTCCTTTTCCACGAAAACAGTATAAAGCATCTCTTAT
AGCTGAGCTAATCTAATCATCATCCATCCAAGCCAAGCGCCAACCCTTTGAGGATTAGAA
CCGTAACATGACATCTGATCGCTTTGTTGCCTCTACTGTCTTCACAACCCTACCAACAGG
CAAGGAAATTGAACAGGCTGCAAATTCTACCCATCTGAACATGTTTGGAACGAAACCTTG
ATTCTCAGTGTTACTTTTCAGTTTCCACAGTTCAAAATTAATGCATAACATGATAGTCCT
TTTCTGATGTAAAACAAAGGATTTGGATTCTCGTTTCAAAAGTGTCTATTTTGGTGCCGC
GTAAAAACATGTTTGAATGACACAAGATTTTCCATACTGAAGTGCAACGTTGCACGAACT
GAGGTGTGTGCAAGGACACAGATGAGGTTAGTAGTGCACCAAGCACCATCTAGAGTTGCT
TTATGGTCAATTCAGCTCTCAGATGCAGTACCCCATTGATGAAGAAGAGGCTATCATCAG
CCATAAACGAAGGCCAGGGAATTGCAAAGAGATTGCGGTAGCCAACCGCCTTCCCACCAG
TGAAGGTGTAGCAGCCCTTGTACTTGCTGACAAACTCACCCGACGGCCTTGTCCTTGCAG
CAAACTCGTAGTCCACGGTAACACTTGTTGAGCCTTTCTCTTGCATCCCTAAGAAGAGAC
CAAAGCAGTGGAAAGCGCTTTGCTGGTCCATGTTGCAATGTGCTGAGAGGAAGAATCCCT
GTCCAGCAAGATGGAATGCTTGCGAGTAAATCCGCCCAGATGGGAATAGTCGGCCACACT
CCTCACGCTTCAGATCCAAGTATGCTATGCACTGAGGATAAGGTCGGTCAAATTCCACCA
CCTTAAGCGGACGATATTTGTAAGCACGTTCAGTATACTTTCTGGAGGTCAACACATCTG
TAGCAAGGGCGCGCTGTCGATGTGGTGCATCAGCTTTGTACAGGAGTGCATCAGTGACAC
TTTTAGTTGCCTGCTCATTATCCAGATCACTGCATGCAAGGACCTTCCGCAACTTCCTGC
AGGTCATATGAGAAAACCTAACGAGTGGCAGCAACCGAGTACCCAAGATTTCACGTTTTT
CTTCTGTTCTTGGGTATTGAGCACGAGCCCACTTGATGACGAAGTCATAGACTGCATCCT
CCGATGCTACCTGAAGGTCATTACTACATAAGATGGCTTCAATCCCAGCAAGGGGGATGT
TCATCACTTCATCCTGAAACCTGAAACGAGGAAGCATTCCTTTAGTTCAACAATTTTATA
TTTCAATAATCAATAATTTAGTTGGCTCTTTAAATAAAGATACTACCCACTTAGTCAAAT
CCTTGTATTTGTTGGCCAGGAATTCCTTGGCAGCATCAGTCAGTGGCTGAACTGCTGCAG
CCATTGAAATGCTGGAAGGCAAATCTAGATAGAGAAGTGCAGATTCTGTGGTCATAGGTA
AGCTTCTTAGCAATTGACTACAGTGTCGCATGCAAGAAACAACTTCAAATTTGTCAGACA
TCATCAAGATGTCAAGCAGAAGGGTTGGCTGATTTGTCGTCAACTTTCCACTGTAAATAA
AACTTAAAAGCTCCATAAGGGCACTTTCCTCTGTTCCAAGTACAAATACAACAATCAGAC
ATAAGGTAACTGTTACCTCGAAAGCAAAAGAACAAATATATTTGCAAAACGGTGGGGTAT
AGACAATGAACTTGCTAGCTCAACTGAAAATTAACTATGGATAACCTCATTGACAATGAT
CATGTCAGTACTACAAAATAGATGAAGCAAAACTGTACAGCAGCTAGGATAGAACATTTA
AAATGCTGAGCGGCCTACTGGAGCTCTCATATTACCTGAAGCAGTTATTCTTAGAGTTGC
ATGCCTCTGGTCAGATTCTTTCATGCCATTTGAGAAAAGCTAACAAGATGAAAGTTATGA
CACTGTTAGCTAGATAACAATACATAGCTACACTGCACAATGAACTGATTCCCCGCACAG
ATAATATCTACCTTGTAAAAGAAGGGACTTTTAGCAGCTAGAATCGCAGAGCTGATATAT
ATGGACTTCACTCTCAAAACCTGATTACACTCCATATTCCAGGATGAATCACTACTTTCT
CCATCGTCACCTGATACAAACAACAAGGTCTAATGAAGCAGAGAGCAAATGACCACATAG
GCACGTACTATAAAGGAACTAATGGTGCACAAGATTCACATCTTCTATATAGACAAGGAT
ATGATGCTTTGGAGCACAACCAAATGAGGAGCAAAGTGTGCTGAATCATATGACTTATCA
GTAACAACATAGTGCACAAACTTCAGAGATCTGGTAGCTTCAAAAGTTAAAGTGTGCTTG
TCCACAAGTATAACAATTGAACACAAGTCTACTTATGTCAGAATTATATCCAACAGAAGT
AAAATCCATCAAACATAACCCAATTGTTCCTACATTAGGTGGGGCAGAAAGAATCAAGTA
ATCATATAACCTCAAGCAATCAATATAAAGTCAGGCATTTAAAATGATTACCACATGTGT
AATATTATAATTGTCAACGCAAGCATGTCTCCACAGTTCCAATCCAAAGGAATGAGTTAC
TCGTTCTGATGCATTGTGCCATCAACTAACTCTAAAATCACATATGATCAGTACCAATGA
TGGCTACGCTTAACAGTTCTCCCAAAAATAATGTTAATTATCTGGCATTGGTGCACGGAA
TCCTGTGTGTATGTGTAAAATTTTCTGAACCTGACTAACATATATTTCAGAGTAATTAAA
AGATATTCAATTGTACTGACCATCTTGTCCGATATCAGGTGGAGATTCTTCTATCATAGC
TACAGGCTCCTCATTGGTTTCCTCATAGGTATCACGTTCATCTGCTTCAATTTTGATGTT
TGCGGGTTCCGATATATACTTTCCACATTCTGGAGGCATGAAATGATAGCAGGAAGTCAT
TAAAAATGGAAGGTTTGCACTCTAGAATAAGAACATGATTAAGAAAGTGTGAATATTAGA
AGTGCATTGGCATAAAATCTGTCATGACAGAAACATATTCTGATAAAGCGAAGTAATAGT
GCATTAGCTTCAGATGACAAGGACAGAAAAAGATCCAAGCAACAAAGCATAAATCCTAAT
AACAATATGAGAACCATGAACAAGCATTAATGATGAATGTCTATGTTATGGTTGCTAGGG
TTTGAGCGGGAGAGAGAGAGCTGCGAGGGCGCGAGAGAGCCGGCCGTGGAGGTCCTTTCC
CACGGCCGGGCAAGAGGGAAAAGGGTTTT