Contig Data
morexGenes
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Map Locations of contig_340308 (1355 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_340308

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_49358 2 1130 bp MLOC_49358.1 Available Available LOC_Os01g43080.1, FRAME:+2, EVALUE:3e-78, 13101.m04442 protein exonuclease, putative, expressed





CDS Structure of MLOC_49358






Contig Sequence (1355 bp)

>contig_340308 1355 assembly3_WGSMorex_rbca.fasta
AGGAACTGACACTTGACACTGAGTTAATAAGTTAGTCACANNNNNNNNNNNNNNNNNNNN
NNNNNNNNCCAAAGTTGACAAGATAACAGCGTGAGACCATTAAAAATTATAGATACGTTT
GAGACGTATCAAGCCTCACATAAGCAACTGTGGATGCATAGATCGACGATGCATGGTCAG
CGAGACACAACTGGCTACCGGGATGGCTCCCACAACAAGCCACCTCGGGACGGGCGACCA
GTAGTCGACCTCATCCCACACTTATGGGTATAGTGAAAATAAATGTACCACTAAAAATGT
GATGACAGATTCAAACGAGCCTTCTGTTATAATCATCGGTTTTCTTTCCTGTCCATTATA
GTTTTTTTTTATATCACAAACTTCGCTTTCGAATATAAGCCTGATAAGAGATTTTTAATA
AGGATTATATATATTCACACACTTTGTTTCATATGTAGTTTATTTGAACATTTAGAATGA
TTTATAATTTAGAACTGATGGAGTAGATTACAAATAGCGTCAACCACGTCAAAAAAAATC
TCCCAAAAAAGACCATGTCAAAAAGAAAAACGCGCCAACTGTTTTCCGGAAAGCATCGGA
TTAGATTAGAAATACCGGCTGGATCGAACTACGGCATCCAGTTGTGCCCTAGTTTTCGAT
CCCAAATTCCCCGATCTCTGCTGCCCTAGTTTTCGATCCCAAATTTCCCCGATCTCGACT
CTCGATCTGTAGTTCGCGCGCACTCCGGCGAACATGGCAGCGATCATGGCGGCGCGCGGG
CAGGGTCTGGAGCAAGATTTCGATTTCTTCGTGGTGGTCGACTTTGAGGCGACGTGCGTG
AAAGACGCGCGGATCTACCCGCAGGAAATCATTGAGTTCCCCGCCGTGCTCGTCGACGGC
GCCAGCGGCCGCATCGAGTCCTCGTTTCGCAGGTACGTTCGTCCTAAACACCACCCTGTA
CTGACCCAGTTTTGCAGGAAACTCACCGGCATCCGGCAGGAGGACNNNGACGGCGGCGTG
GATCTCGGCGAGGCACTCTGGCTGCACGACGCTTGGCTGAAGGCGGCGACGGCGGGGGCA
GGGAGCAGCAGGAGGGTCCAATTGGCCGTCGTGACCTGGGGTGACTGGGATTGCCGGACC
ATGCTCGAGTTCGAGTGCCGCTTCAAGGGCATCGAGAAGCCCTCCTACTTTGATCGCTGG
ATCAACCTGAGGGTCCCCTTCCAGGCGGCGCTCGGCGGCGGAGGGCGGGTGAGCCTGGAG
GAGGCGGTTGGGGCGGCGGGGCGGGGCTGGGAGGGCCGCCTGCATTGCGGGTTGGACGAT
GCCCTCAACACGGCACGGCTGCTTGCTGAGATCAT