morexGenes - Barley RNA-seq Database

Contig contig_339126

Source Contig contig_339126

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

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Map Locations of contig_339126 (856 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
No map location	No map location	No map location

Predicted Genes from contig_339126

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_49289	1	223 bp	MLOC_49289.1	Available	Available	LOC_Os08g08230.1, FRAME:+3, EVALUE:5e-21, 13108.m00855 protein kinesin-like protein, identical, putative, expressed

CDS Structure of MLOC_49289

Contig Sequence (856 bp)

>contig_339126 856 assembly3_WGSMorex_rbca.fasta
ATCCCCTTCCATGTGCTCTTCAGATGCACACGCAGAGCTGCCTGAAGATGGAGGAGGAGG
CGGAGAAGGAGCACAAGAAGATGGTCGACAAGGTCTCACTGCAAGCCGACGAGATGAAGG
TATTTTGATTCGATCCATGCTTGGTCTGGTGTTGGCCTCTGAATTTCGCGTGGATTTGGA
CCCTGAAATTGTGATCCTACTGTCGGTGTGGATTCCTTGCAGGCATCCTACAAGAAGTTG
GTGACAGAGGTGCAGTCGTCTTTGTCTCGTGGTACTGCAGCGACCGAGCAGAGCCGTCTA
TCTATCTCAATTTTACTGCACTTCTATCTTCTCAATTTCACTGCACTTCTATCTTCACAT
CTATCTATCTGAATTTTACTGCACTTCAGTCTTTAGTTCAAGCCACTATGGCAGTAGTGT
ATTGTTTAGTACTGACTTGGTTCACAATGGTCAGTGTGCAAGGTGACCTTACCTGAGATA
GGAAAGTCCATGGCCAGAGCTCTCGATGGCCTGCGCAGTCGCTACAACATCCCAGCTACA
ACAACTTAGCATACAGTTTTCTGCTACGTCTCTGAATTGGTAATCACCTCTCATGTTTCC
AAATTGGCATCCTGTATGCGTTTGGTCATGTTTAGTAAATTTGCATGAACGTACGAGCGT
TTGTCCATGAGATCGAATTGGCAGATGTTAGTATCTACCAGGGACAGTAATTGTTGGTTA
CAGGTTACCATAGTGCTGTGGTTCATTGTATATGCAGTTCTACTAGTAGCGGTCAAAATG
CATCAAGGACGGATAAGAGATCACTAGAGCCTACTACATGATCCTATCCCGTCACAAGTT
TTTTCTTGCTTGGTTG