Contig Data
morexGenes
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Map Locations of contig_337042 (8083 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_337042

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_49178 1 3556 bp None Available Available LOC_Os01g54870.1, FRAME:-2, EVALUE:6e-72, 13101.m05767 protein 60S ribosomal protein L18a, putative, expressed
MLOC_49177 1 1086 bp MLOC_49177.1 Available Available None





CDS Structure of MLOC_49178






CDS Structure of MLOC_49177






Contig Sequence (8083 bp)

>contig_337042 8083 assembly3_WGSMorex_rbca.fasta
ATGTCTAGGACGGCATGCGACGTCGCCCGACTGCATCGGCATCGACGACTATGGCGTCGG
AGGAGCCGCTCACGCCGGGCATGCCGGAGGGCGACGTTGCACAGAGCCGACACCGCCGTT
CTGCACACCGAGAGGAGCACTGTCGGGTCGAGGGCTGCTCCGTGCTCCGTGCTAGGAGCC
GCATGCGTCACCGGGAAGGCATCGCCGAGGTTGCGTGATAGGCGGGCGTTGGCGGCTTCG
CGTCGAGGCCTCGCCACCTCCCTTCCGTCGCTGGACGGAGAGCCGGTGGTTCCGGTCGCC
TAGTCCAGCGCAGGGTCGAGGCGAGACAAAGCTGATGGCGACAAGCGCAACCACCAGTCC
AGCGACGATGGTAACGAAATGAGGCATCATACCTTTGTTGATTCTCGTTCTGTAAAGAGA
AATTTGGATAGATGGATGCCAGTGCCCTTGTTCTTCATTCTCTAGTTCGCTTCCTTTTCC
TCTATGCATCACTAGATCGATGGGATTCTCCTTCTTGTTTCTTCCCAGATCGAGAAAATG
CGTTGGGCTCATGTGGTAGGTCGCCACAACGGTCGGATGGAGACCTGCACAGCGCTGCAG
GGTGAGGCGTGGATTGTCGCCGGGCGATCCCCTTGTCAAATTGCTTCGCTGGAGAGCGTG
CTGATAACATTTTAAATAGAATCGAGAAACAAACAAGAGAGACAACAAATGATTCAACTG
TCTCCTTTTCATTGATGATGATGTCTTATATAGGATTACAAAGGATGCCTCCAAGGGGTG
TCTGTACAAAGGGACATGAGCAACCAACATGCTAAAAGTAATTGCCTTGGTAATTAAGAA
AAGCAAGGATTAACATAATTAATTAATCATAACAGCACCAACCGCTGCGCCATGAGCGGC
CGTGGCGTGTGGAGATGGGACATGCGCCGCCACGAGCAAAGCGTAGTTGGTTGTTCGCCA
ACGCCTTCGCCTATGTCATTCGCGAGAAGCTGCGATTCGGGCTTGGTGGCCGCCAGAGCC
GTGCCGCTATAGGGCATCGCAGCGCCACGACCTGCAGGCCGAGCCATTGGTGGGTTGCTG
CCTCGCGGTCGGCCGTTGAGATAGGGATCGCCGCGCAGGCAATTATCCAAGAGCATCGTT
ACTGTCCGGGAAGATGAGCACGCACCAGAAAACCACCGACACCGCGCAGGCAGTCGTCGA
GGTCAATGGAGAGGATACGCCAGCTGGGATGGAAAGAATTGTCGCCTCTGCCAACGTTGT
GGCATCAAGCCTTGTCTGCCCCGTGAATCCAGGACAGCAGTTGCCACGTCAGGCGCCAAG
AGGAAAGCGTCGTGACCAGGGCCTTGGCTAGTGCAGGAGGACCGGGCTGAGGCCGCGGTT
GCCGTCCCGTTGTGCCATGCGCTGCCTTTGCGAGTGCTAGAGCGTTGGCCATCGCAGGGC
CGAAGGGCATCGCCATGCTGCGCCATAATCTCTGGCTGCCGCAAGTGTGGCCTTGAAATT
GCTCCACGAGAGAGCGTGCTGATAACGTGTTTGAGATCAAAAATCTGTCTATTGATGATC
ACAAGTTACATATTTATAGTCCCCGAAAGAATGCATCCGAAGGGACACAACGGTTACAAG
AGTTGCATCTCTTTGTATGACGGTTTGGTAAGTGGAGATTTAATCCTTAATTAAAACATA
TTAATTAAGTCTTAACACTGATAACGTGTTTTAGATCAAAAATCTGTCTATTGATGATCA
CAAGTTACATATTTATAGTCCTCGAAAGGACGCATCCGAAGGGACACAACGGTTACAAGA
GTTGCATCTCTTTATATGACGGTTTGGTAAGTAGAGATTTAATCCTTAATTAAAACATAT
TAATTAAGTCTTAACACTGATAATGTGTTTTAGATCAAAAATTTGTCTATTGATGATCAC
AAGTTACATAACGGTTACAAGAGTTGCATCTCTTTGTATGACGGTTTGGTAAATGGAGAT
TTAATCCTTAATTAAAATATATTAATTAAGTCTTAACAGAGCAACACGATGGTCGGGCAA
AGAGGACGTGCTGGCGCAAGCCAGGCGCTGACGGGAACCACCATGGACGTCCGTGTCACG
CAGGACGCGCAACCGCATTAGGAGGATGGGTCATGGCCAAATGGCCTTTAGCCGTCTTGT
TATTTGCCACCGCTGCTGTCGGCGGTCATGTGGCAGATTGAAGTGACAGAGGGAACCGTC
GCCGCAGCCGCATAGCATTTCCGGTGTTGGCCTAATTGCTCTCTGAAAGAGGCGTGCTAA
TAACGTGTTAGAAACAAAAGCAAATGGTGTAACTATCTCCCTCTTTCATTGATAGTGATG
CTTATAGTTAGGGGAACGTGATCAGAGATGAACAGATGCGATGGTTAGCACTAACAGATA
ACAAGTTAAAATTTACCCTATAATTAGCACAGTTAATTAATTCTAACATCATTAACTATC
TTTCTCCCGACCGAAATACCAAGGGAGGTTTATTAGTCTTATCCTCTTGTGAGATATTGC
AAATTTCAACCGTCAATTCCACGCACATCCAAACAACATACTCCTTTCATTTTTATATAG
AAGGCCACTATCAAAATTACAATCTCCATACATATAAGGCCACTAACACTAATCAATGCA
ATATTAATGGTTTTTGCTTCGTAGTGCTAGCAAGGAAGACTTGTAATGCATGAGAGAAAA
AAAATACAAATTAATTTACACAGTAAACAAAGAGAACTTTTGCCTTGTACCTGTAATGTG
AGTTTGTAGCCTTGTATATAAAAATGGAGGAAGTAATTCATGTTCATTGTCAATATCAAA
GAGGGTAATTTTATATTGGGGCCAATTCAGTTCCATGACCTGAATATCAACGTCCAAACA
GAGCATAACGTATCAATCTGGTGCTAGTGTGAGTTGTGACACTGGATGGTACAGAGCGAA
GCCTTCCTGGAGCTTCCCCCTTCCCTCACCCGAGAATTGCATTTCCGCTTCAGCTTCCCC
GGTTTAGTAGATGAGGTAACCCATTTTTCTTTTTTACGAGGCACTACATTTTCCTTCACA
AGTTACTGATTTATATGTTACTCACTATTAAGAGTTTGCAACTGAGTATAGTACGATAAA
TTTATTTTAAACTGTGCTTCCAATTCACCGATGGAATATACACCATATAAACAGTGAAGA
GCTCACTTGAAAGGAATGCACAGATCTTTCGTCATCTTCAATTGAAGATACACCATTTCA
GATATCGGTGCCTCACAATTTTAAACATACAGCAGCAAAATCGTATCTGTCATAGATAGC
CACAAGCCTCAAGAACAGGCAGATTATCTAATTGCCAAACATATCAGATCCCCCAATTCA
TTACTATCTCTACACCTGAGTAACATCTATTCAGCACAGTAAAGCAAGCTGGAAAAACAA
AGACACCCTTTATTGAATACATCCATTTGAGCGGCAAGTGATATTTGAGCAACAAGTGAT
ATGGATCAAAGGGAGTAGAAATTTAGTTCACATCAGAAACCAAAAAAGACTTCAGTTTTA
AATATATAATCTCACAATTCAAACCAAATCAGTTAAACAGTATCATCATTTGTACAAAGA
TATTGAAACTTGGTGCTGCTTGCAAGGAATGCACTTTAACTAGATAAAATTACAGATAAA
TAAGTTGTTGGCGAGGATGCCTGCCACAACCTGAAGGTCACGGAGCTAGAGCATCCTCGC
AGCAGTGATGTAGGCAACAGGGAAAAAGAGGGAACCAAACTATTTGTTGGAAACCTCGGC
AAAGTTGCCTCATAACCACATGAAGAAACTTAAAACTTCCAAGGTAACAGAAACCGTTGA
AAAAAAAAACAAATACTTTGCTAACAACAATTGGGGATAAGATGTTAGCGAGGATGCCTT
CCATAAACCAAATACGGTCAATGAGCTCAAGCAACCAAGCAAATCGATATAGGCAACAGG
GAAAAAGAGGAAACCAAACTATATCTTGGAAACCTCGGCAAAGTTGCCTCACCAAATCCC
AATGATAAATGAGATCTAGTGAGCAGAACTGAATCAAATAGAGAGTTTGGAACTGCAGAA
TACACAGCATAGAGTGATACTCCCTCCGTCCCAAAATAAGTGTCTTGAGCTTAATACAAC
TTTGTACTAGAGCTAGTATAAAGTTGAGACGCTTATTTTGGGGCGGAGGTAGTAGTAGAT
TATACAATAGAACTACCAAGTATGTTGACAAGTATGCATACCATAAACCTAAGAAGGTCG
ATGAGCTTGAGCAAACAATTGACAAATGTTGTAGGCAACAGGGAAAAAGAGGAAACCAAA
CTATATCTTGGTAGCCTCGGCAAAGTTGCCTCACCAGATCCCAATTATGAATAAAATCAC
AAAAACTGAAATATATCAGCAGAGTTAGGAGAATACGCATATTTCGCTATATATAGGCAG
TGTGGAAGTAACAAGCATGTTGGCAAGTATGCATACCATAAACCTAATAAGGTCAATGAG
CTTCAGCAAATAATTGACAGATGTTATAGGCAACAGGGAAAAAGAGGAAACCAAATTATA
TCTTAGTAACCTCGGCAAAGTTGCCTCACCAAATCTCAATGAGATGTAGTGACAAAAACT
CAAATATATCAGCAGGGTATTCGATAATACACAATTCTTCAATACAGTGTTGAACTACCA
AGCATGTTGACAAGTATGCATACCATAAACCTAATAAGGTCAATGAGCTTGAGCAAACAA
TCGACAAATGATATAGGCAACAGGGAAAAAGAGGAAACCAAACCATCTTGGCAGCCTCGG
CAAAGTTGCCCCACAAAACCAAGAAATAATGATCAAGAACTACGATTGAGAGAATAGCAG
ATAACTAAAAAGAATTAAGTATGAACTTATTTTATAAATGTTGGCATGGATGTCCATCCA
TAAACCATCAGGTTAATGAACATAAATTGAAACATCCAACAGCAAGCATGATTTTGGCAA
CAGGGAAAAAGAGGGAACCAAATGAACTGTTGGTAACCTCGGCAAAGTTGCCATCCTAAC
AACTGGAATATTTGTAATGGTGTTCAAAACCAAAGTATCTCAATACAAAAAAAACACAAA
AATATCACTGCTTGGATGACAGAATAATATCACTGCTGATAGCAAAAGGAATAAAAATAT
AAACCAAGTCCAATTATGCAAATCAATGAGACTAGCACATATGTATGACAAAGTACATTC
CAATCATTACAGTCTTTACTTGGCAAATCATTTGTCCCAATCATTATATATGATAAACAA
ACAAAAATGAGAGGGAAAAGGTAGTTGATGTGCCCATCTCCGGCAGTCATATAACCAAAA
ATATTACACAGATTAAACAAGTGTTGTCAAAGCCCATAAAGGCCACTGCATGGAACTGCT
ATCTAAAATCAAGAAAAGAATTATCTTGCATATGGATAATATTAATATGAACTAGCATCT
TATATTAGTTTACAGAGGGAGTACTTCACAATGAACAGGCTTACAGGTTATGGACGGATG
ACTTGGATCACATGAACAAGTTTGGCCTGGAGGCCTTGAAGGTGGTCTTCAGCTTCCTGG
TTGGTGGCCTGACCTTCTGGTAGACAAACGGGAACCTGATGTCTGACTTGTGAAATTGTG
GCCTGACCTTCTGGTAGACCAACGGGAACCTGATGTCTGACTTGTGAAACTGCTTAGTGT
TATCACGCTTGCAGGTGCTGAATATGACAGTGGCAGTCTTGATGATCTGAATGCAGGGGT
GTCTGACACGGTGGCGGGAAGCCATCTCTGTGTACATCTGCTCAACAGCGCCATTTAGGG
TGGTGTCACGGTACTACTTGCACATGTTGTGGTATCCAGTTCTGCTTTGGTAACGCAGCC
AGATGCCAAAGTTCTTGATTGTCGCGGGGTTCTTCTCAAAAATCTACAGATAGAACAAAG
GTAACAGCATAAGCTAGGCATATATATTAGAAGTCAGAGACTGAATTTTGCATCATCAAG
ATTAATCATCTACAATTCTAACCTACAATGTAATTCGAGAAGATTCGAAGTCAGAGCAGA
CGTCTAGCATTTTGACCAACTAGAACAACCCCATAAATAACTAGACACTACAATCATCCA
ACATTTTGACGAACATTAATCAGAAATTAGAGCAGACGCCTTTCGCATTTTGACCAACGA
GAACAGTTGGACGTACTCTAAATGAACGACGGTCTATATCCTTCTAATGGCATTGCCAAG
TTAGTACGATACAACCACGGAGTAAACTAAAATGAGAGTGGAAGAAGAGCTCACCTCGTT
GAAGGCGAGGATCTGGCCGTTGCTCTTCTTCACCTTCTTCAACTTGACATGGCGCGGACC
TCGTTGGTGGCCCAGAGCTTCATATGCGGTAGATCCTGGGATGCTCCTAGGTCGGCGTCG
GCAGGCCCCTCCCGACCACCTGGTACTGGTGGAACTGCACGAGCGCGAGGGTCGAATGGT
CAGTTCAGATCAGGCGACGAGAACTGATCCTCGTGACGGCGGCGCGTACGAGTAAGAAGA
GCTCACCCTGAACGCTACCATACTCGCCGGAGCTGCTGAGGTCGCTGTGCGGCGGTGGTG
GGGTGGGGCGACGTCCTTGCTGCCGTGCGATGCTCCGAGGCGACGGCCTTGCTGCCGTGC
GATGCTCCGAGGCGGCGGCGGCGGCGGCGCGAGGAAGGATTAAGGGGTCGGGGGGATTTA
TAGATTAAGCAGAGTGCGACGAGGCCGGAGAGGCGGGTGAAGGGACGAGGCGTAAAACCC
TAGTGGGCCGGGAACATTGTGGGGTGAGTGTATCATCGTAAGCCCAAAGGCCCGCAGAGC
AGTTGTCTCAGTTTCTTTTCTTTTTCTCGTGGGGTGATTTCTTCTTTTCTAGAGAGGGTT
TAAGGTTCAAAATGTAAAGATACAGATGCAAAAAAGTGTGAGGTTAGATGCTGTTTGACC
AACAAGGGTGATGGTTCAGTTTCGGATGAAATATTATCATACTATCGTCGGCCAGAGTTT
CTTACAGCACCGTGAACATTACATCAAGGCAAGCATCATCTGATCAAAATTAAAAGATAG
ATACCTAGGAGGACAAACATTTGGGACATCCATCCACAAAGACAGAACAGGCAGCGATCA
AGGTAAATAGAGGTGGCAGCTTGTCCAACTTCAGCTCGCACAGACGGAGCTTCCCTCTGC
CCAACAAGAAAAGTCGCAACCCGCCGGACGGACGTGCCACGGCAATCTACTGGGCCGGCC
AAAACACCACCTGCTCATTGTGTCGGCTGCGACTGCTACACCAAGACAGAGATAGAACGT
TGAGAACTTACTGCGAACACCTCCACCCTATGCACGTCATCGCAAACAACACTCAAACAC
AACACTGAACTGGTGCTACAGGCGGGAAGGCCGGTGAGAAAATATTGCATGGACTCGAGC
TCATAGACAAATTGCGACTGTCCTGGCCTTGTTTCTTTTTAACAGCAGATGCGTAGGCTA
TTTACTTGTAGAAACCTTGTGGATGCATGGCTTTCCCATCTCCAATCCTCGATCAGCCCT
ACAACCTTCAAACTTTTCTAACCTGAGAATAACACGATTAATTTGGTGAGTTCACCAAGA
ATATTTCATCACAATGCATTGAATATAAGATTACTGTCCCGTGCTTGCAAGTTGCGGCAG
CTTCTAACAGGATAACAAAGACTTGCTACTGCTGAACTTAGTAAAGTAGAAAGTGGTTTC
GTAGATCATAAGAGGGAGTTTCGATGAGTTTTGGGTATGGTTCAAAAAACTAAATATCAG
AGCTCCTCAAACCAACACCCATCACTCAAATATCCCCTAAATCTTGATAAAATTCTTGAT
CTGAAAACGAACAGGATATCATATACTCAATCCAGGGAAATCATGAAAAATCGGCACCAT
TTTAAAAATGTTTAACATTTCCGTAGTTCCGAATGACAGCAAAGTTTCTAATGAATAAAG
CATTACCCAAATCCCAGGACATGTAAACCAATTTAGCTGAATAACAAATCAATTGCTACA
AATTTTGTTACCATGTTCAGCCTTGGGGGGGGGGGGGGGGGGG