morexGenes - Barley RNA-seq Database

Contig contig_335501

Source Contig contig_335501

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

morexGenes Home
BLAST Search
Keyword Search
Samples and Analysis

Links

James Hutton Institute Home
BioSS Home

Map Locations of contig_335501 (311 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
No map location	No map location	No map location

Predicted Genes from contig_335501

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_49099	1	311 bp	AK370975	Available	Available	None

CDS Structure of MLOC_49099

Contig Sequence (311 bp)

>contig_335501 311 assembly3_WGSMorex_rbca.fasta
CACATCGCCGACCCCGTCAACAACAACGCTTGGGCATTTGCCACAAACTTCGTCCCCGGC
AAATAAGGTGTCCCGGAGCTAGTCATGTTGAAGTGTGAGGTTGTGTGGTTTGATTTGTAC
TACCATGATGTAAATTATGAGAATTCTATGGAGAAGCATTGTTAGATTTGACCATCTTCA
TTGTCTTGTCTTGCGTCAATCTAGCAATTTGTTGGGATCACCAGAACAGTGAAAAAACCA
TTGGCACGCAGTTCTTAGATTAGCGACAAACTTATGCGGCATACGTATTCACTAGTGAAT
TTGTTGGCTCT