Contig Data
morexGenes
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Map Locations of contig_334178 (6743 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_334178

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_49031 1 1475 bp AK374032 Available Available None
MLOC_49032 2 999 bp AK374225 Available Available None





CDS Structure of MLOC_49031






CDS Structure of MLOC_49032






Contig Sequence (6743 bp)

>contig_334178 6743 assembly3_WGSMorex_rbca.fasta
GATGGAAGTGTCTTCTTTTTATTTATTCGATTTCAGGTTAAAGAGGTTTTTGATGCTATT
GCTCCTGTGGTGGGCTTGACAGTAGCATCAGCAGTTGGTCAATCGTCCATCGCGGATGAA
ATCTCAGATCTGATCAAGAAGTCCAAACAAGAGCTTTACCCATCTCTTGATGATGAATAT
GTCGAAATGGAACCACAGACTAAAGTTGATATATTGGTGGCAACTCCTGGAAGATTGATG
GATCATATCAACATGACAAAAGGTTTTAGTCTGGAGCATCTTCAATACTTGGTACGCTTA
TTTGCAACAATCTCTGCCTCCTCTTTGTGCACACCATTCTCCATACAATGGATGGCCAAG
TTCATATATGATGTGTTGATAGGTCCTGTACTCCTGTTATACATATTTGAGGTATTTGAG
GTAGTATTGTTTGCGTGTGCATAGTGCCGCAGTAACATGTAATGTCAAACATTATGCTGG
CAATTGGTTTGGACAAGTGCATAAGATTTACTTTAGCTGGCCTGTGTCCAAATAGCAGCA
ATACGTTATTATCTTGGGGCATTTTGGGTGACTAAAATTATATTCTAGATTCATCCCTTC
CTTTAGACTCTTGCTATGGATATCATTCAAAGCCATGTGGGTGTTGCCTCTAGTTCCACA
AGTTTGGTACGCCCTACTTATGCTCTTTCCAAAGAACTATCAGTTAACACGCCAGCTGTT
TGTACAATTCTTCCAAAGAACTATACTTTTGCATCTTATTAGCATCGCGTACTTCCTTCT
GAAACTTGCGATTTCAGGTTGTTGATGAGACAGATAGGATGTTGAGAGAGGCATATCAGT
CCTGGTTGCCAACAGTTATCCAGTTTACTCGCCCGACTAAGCAAGATCTTTTCCGGCATG
ACACTACCGGACGAACTCTACTTCATCCATTGACTACCATTAGAAGATCGTAAGCCTTGC
CCTGCCAATTAATTGCTCATATTATTCTTGCCCTCTTTTATCACACTATATTTCAGTCGA
GGACTTATATCTATGCTATGGCATTTAGGGGTGTCGAGCGAGGGTTTAAAGGTAAATGCT
ATCCAAGACTGGCAAAGATAGTCTGCTCTGCTACATTGACTCAAGATCCCAGCAAACTTT
CTCAACTTGAGTTGCATCATCCTTTGCTGTTGAATAGTGGGAAGAAGCGTTACAGAATTC
CTGAAAAGCTGGAGTCCTACAAGCTGGTTTGTCAGCTTTACTGATTGTTACTTTTATGAA
AGCTGATGCCTGAAATACGCAATGAGTGTAAAAGGCTTGAACTGCCCCATGCGTTCTCAT
TCTCCTTGCTGTTATTGCAGATCTGTACATCAAACATTAAGCCACTGTGTCTTATTGTTC
TCCTCCAAGAGCTGCGTGGGGAGAAGTGCTTGGTTTTTACTAAATCTGTAGATGATAGTC
ACAGACTAAGCACTTTACTGGGATTTTTTGAAGACTTGCCCTTTAAGTTTAGTGAATTTT
CAAGTTTGCAGCGTGAATCTACTCGAAGGTAATTACTCATGTTTGTTTCCTGTTGTAAAT
CAGAGTTCATTGTCTTGAGTTGATTGCAGGCAGTCACAAAAATAAGTAACTACAAATAAC
CATCTCTGACTGAATATGCCTTATACAACTTCCATGGATTATATTGTTGTTTAGAGCATG
TGGGTGCAAACTTAAGAAATCGGCAATACTCATTAATTTAGCTTCTGTTGATGGTGGAAT
TGAATTGAGATACTGATATGTTGAATTTATCTCACCTTGTGATATCTATAAAACTCTACT
GCAGGAAGACATTGGCAGCCTTCAAGGAAGGGGAAATAGATGTCCTAATCGGCTCAGATA
TAATGGCTCGAGGAATACATATCAATGGTTTAAGATATGTTATCAACTATGAGATGCCGC
AGTATGTGAAAACATACATCCACCGAGCAGGCCGGACTGCCAGGGCAGGCGAATCTGGTT
CTTGCTTCACGTTTTTAAGGAAAAATGAGGTATTGCACTGTTTAAGGATAATAATAGTTA
GCATTTTGGTACAATGCATACTGTGCTAGATTATTAATGCACCATGACAATGTACAACTG
TACATGTGATGACTAAAAAATATGCAGACCAACAACTGACCTCATTCCTGTATTCTCGGC
TAATTAGATTTCTGGGAAACAATCAAATTGAGTATTCCGATTATATATAATTTGCGGTAG
GTAAATGTTGTATAGTATTTTCTTGTAGAGAACTATTGGCACTTTCTGATTTGGTTAGGA
CTTACGAACGCATTAGATGAATCACCTTGATATTTGATTTAGAGTTAAAACAGATGTATC
TGCTACCAGATGTATAAATTAATCTCAGCATATTCTTCTCTTGTTACTTGAGTTGCTGAG
TCAAATGTCATGTAGGTTAAAAGATTTGACAAGTTGCTGAAGAAGGCAGATGGTTCTAGC
TGCATCCTACGCTCACTACCCGAGGAATCAATAGAAAGCCTTCGCCCAGTTTTTGAGACC
GGTGAGATAACACTCCTGTTTAAACCAGATTATATGTTGCCCTGCCATCGCCCACGCCTT
CGATGTTCTTCATTGATTCTAATCTTGTTTCGGTTTCCTTTTTTCCTTGCTTGGCTGTTA
AAAGCTCTGGAGAAACTGAAAGATAAACTGAAAGGGTCTGCGGAACCAGAAGCATCAAAG
AAATCTAACAACTCAGGAGATAAAGCGCCGGGAGCTTTGAAAAGAAAGAGAGGCAAGCAA
ACGTGAAGTGTAATCGATCAGTCGGTATTCTGAATTGTTTTTCATAAACGTCTTAAATCC
CCTTCTGGTACATATATTTGGGGAGCCCTACTATCTGAAGATGCGGCATGTTTTTTTTTT
TCCTGTTTGCTTTTTCTATATGTAGCACCTCTGTTACCGCTACTGATCGACACAGCGCAA
TTCAATTGTGGATCGTGTGCTTTAGTAGTTTTGGCTGATCTAGTCTGAACAATTGTTGGT
TAATCTGAAAATTATAGGTGCATGTGAAATTAAATTTTTGTGCCTTTCCAACTGAGCCCC
ACCTGCATTCCTGCAGAATTTATTTGGTCCCCCTTGTTCAAATGCCACAAGTCGAAGTTG
CTTCTCCTTGTTCATCAGAGTTGTCACTAGTATTTTTTTTTTAGTTAACAAGCACGGCCA
AAGATGCCCTAATATCTTCACCAGATCATGTAATTTACGCATCAAACATCGCGGCTTAAT
ATCTTGCCACCACCTGCATCCCAGCCATTGGCGCCTAAGCATTTCACGCATGGCTTTACA
GTAAACGCACTATAACTAAGGTTATCTGACTGGCTGTCCAAAAAGCGCCTGAAACAGCAT
ATGCTCTCCTGGCTCCCACATGATAGATAGATTATCTTCCAATTTGTTGACCAACTTTGC
ATTTGTACCTTCTATGAAAAACAACTTTGCATTTGTACCGTTCGTTGTCTACTCAAAACT
TTGATATATTTTTAGGTTCGAAAAAGAAACTTTGATGTTTTGGACTCGTGATGAATTTGA
TTCCTCTTTAGCTTTGTGCAACAAGAGGAACGGCAGCTCCGCAATAATTTTTGATATAAA
CAAGACTTAGAGACTAGAGCAGCTTGATCATATCCCAAAAGGGTGAAAGAGATATTAGAA
GAAAAGCTATTGCATATATAAATAACAAGAACAAGAAAAAGGTAGGGCTAAAGGTTGCAT
GATTGCACATCATTTCTTCTTCTTATGAACAGACATAAAGGCCAAGAGAAAAAGGGTGTA
GAGCTGGCTGGCTATTCTACCCCCAGAACTCAACCTTCTGAAAGAACTGTCCCTCCCTGG
CTGAAACAACAACCGTCCACTTCACTGTCTACCGTCGTCCCCAATGGTCCGGGAGCCATC
GACGCTCACACCGCTGTTCACCAACCGAGGGGATGCAGGGCTGCCGCCTTCGTGTAGGGG
TCCTCCGGCATTACCAGCAGGGCGGGTGGCGGAGCGGAGCGACGATGAGGTCGCGGAGGA
GATGACGGAGGCAAGGGAGATCGGCATCAGGCAGAGCCCCTTGCCCTGCAGGTACTGCAT
GGCAGTGCCCATGTCCTCCTCCATCAGCCTCGCCACCTGTTGCTCTGTCGCCCGCAAGGT
GCTGCCACCATTGTTGTCCTCGCCATTGCCGTCGCCGCTACTGCTGGTCCCGTTTCCATT
TCCGCTGCTCTGCAAGATGGACTCAGATTTTAGTACAGTACAGTGGGAATTGAGCAGACG
ACTCTTATAGAAAAGCTGATGATTTCTTCAACATCAACAAAAAGAGAGTTAATGGGGGTA
TTTTGTCGAATTCGAGACGGTGGTTGACCTTGTAGTAGCTGGGGTATGTTCTGGGGCTGG
CAATTGTCCTTAGTGGGCAGTAGCTCCTACAGCCTAACTGCTTGATTGGTAGTTTGGTAC
ATGGTGGTCGCTTTTCAGGCGTGTTTTCCTTTTTCCCTCCAGTTCTTAAACCAGCAAGAT
TCTTCTGAACCTTTTTTTGTTGTGCTGGCATCCACTACTGCTTGATCTGTTCCTTAAGTA
ACAATCCTTTTGATTTCAATGTGGTGCAATTTTTATAGGCATACTATTAATTTAGTTGCA
TAGCTCTTTACTGTGACTTTTAGTCCTCCGAATGCCGAATTCAGATTTTTTATAGGTTTT
ATATACCTATATTCTACCATGTGGACTTGAAGAGGGATCCACCCTAGACAAAAATAATCA
TCCTTTTCATATACAACCAAAAGTTAAGTGAGTCAGAATCAGCACACCAACTTGAAAATG
ACAGGATTATGAGTATCTATTCGTACCGGACCAATGGTCAAAAGGCTAACATTCCATATA
CACTTTGTGATCTAACAAACGTAATTAGCGGATTTTAGGGATAAGAACAAGTTGGCCCAT
GCAAGCAAGCTAAGTGTTTGGCTCTAGGCTAATAGTAGTAGTAAGTATGTACAAGTCGTT
GTCAGTGATGTAGGATTCCTCCAGAAAGCAATCACGTATAAGCTTGTCAAAATGGAAGAT
CATATAACACAGGTACCTCTGATGACAATCCGGCAGCCAGAGGGCCAACTGCGGCAGCTC
CGCCTAATCTGCTCATGCTGAGAACCTGCAAAAATTGGGACATCTGATGATCAGGGACCA
TGAGTTCCATCAAGGAGCAAACTGACTAGCAACATTCAGAAGCTCAGGTACTAGTAGTAA
CCTAGGCTAGGTGTAGAAAAGCCGAATTATGTACCTTGACTTGAAGCTGGAGGAACTTGA
CATAATCAATGATCTCGTCAAGCATCGATGCCTTGTCGGTCTGCAACAAAATTCCATCTT
GTTATTCCAGTTACAGTGACCTATATATGTCCGGTCTAGTTCCCATTGTGGCGGCTTCGT
CATCTAGGACATGACAACTGATATAAGGTTTTATTCCAGAAAGCCAAGCAATCGACATTC
GTTATCGCTCTAGATACTGTGAACAGCGAACAAAAGTTGTGCAAAAAAAAGATATCGCAT
GTGCCATTGGAAGCTCCGGGAGTATCAACCGTGGCACGATGCGGTGGGGAGGGTGTCGCC
CCTCCGGTCCATGGAGAATCCAAGAAGGTTGAGCACTAGACAACGCCCTTGTATGTGCCG
CTCTTGTGTTTCGAAACCGTCAAAGAGTCCAAGAAAGCGGCATGACTCAAAGTCCAAAAC
TCCAAACATGTTTATGTTGTTTGGAACACCCCATACATCTGTCATTCACCTCGTGATGCG
CCATATTATAGTTCTAGGAACCTAGTGTTTAGTGGAATGATCATGAAGCCCCTAATTTAA
TCTTCACCCTCCCTCGATTTGGCGTCGCCATTTATCTATAATTGCCCTAATTGGTACAAG
CTTTGGCCTTTGCCGAAAGCGATGATGGGGATAACAATTCTCATTCTCCTTGGCACCGTG
TCTGATCTCTCTTTTCCCTACTGCCGCTGCCTTACCAGTTGGTTACTACCACCAATAATC
AGAGGTGACTAAATTACTAAGCCAAATCCTCCAACCGAGAACCGACATGTCAACCCTATC
CCCTGGATTACTCAAGAGTAATCAACCACACAACTCCAACTACCATCCATGCTTTCCAGT
TCCATCACGCACTTGCTGTTTTACAATCGCTGATGCTACTATATATACAAAGATGGCATG
GCATCAGTACACGTTATATACTACTGTATGATAGTATGATAAATCAGCTTTACCCCGCAG
CAACCAATAATGCAGGAAACACGGATGCACGCATTTCTCACCAGGATTCAGGGAAGGGAA
AGCCTCCTGCTTTGCTTTGCTTTGCTTTGCTCAAAGAGGGTGGAAAGATGTAGACGAGGG
AAGAAAAAGGCGAAAGCGGGAGGAGGAAAGGCGGGGCGTTTTCAGCTCACCTTGTTTGCG
CTCGGGACCAGCTCCTGCAACGCCTTCATCCTCTCCGCTATCCTCTCCCTCCGCAGCTGC
AAAGAGTGTGAGGAGAATTAGACCTCGTTTCCAGGCTCATCTTGCTTGCTGGTGCCGGCA
TTTTGATTTTTGAGCCGGGATGCCGGTGATTTTCGGCGGTGGAGCTGTGGAAGGTTGGTG
CTGGAACAGTGGCGGATTGCGGAATGTGTGCAGTGGAGTTGCGAGAATGTGACGGGTCCG
GTGATTGTGGAGCGCGAGTCGAGGAGCAGGAAGTCAAGAACAGTGCAAGATGCAGGAGGA
CATAATCATAATGATTGGGGGGG