Contig Data
morexGenes
Links



Map Locations of contig_332109 (3433 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_332109

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_48924 1 501 bp None Available Available None
MLOC_48925 2 1255 bp MLOC_48925.1 Available Available LOC_Os01g14090.1, FRAME:-1, EVALUE:2e-74, 13101.m01551 protein kinesin motor domain containing protein, putative, expressed





CDS Structure of MLOC_48924






CDS Structure of MLOC_48925






Contig Sequence (3433 bp)

>contig_332109 3433 assembly3_WGSMorex_rbca.fasta
AGCACCCGAGCGTCCGATGAGACCAAGAGGAGGAAGACCTCCGGGCGGCGGTGCTCTCGG
CTGGAAAGCGACCCTAGAAAGCCCACGGAGGCCAAGAGGAGGAGGTCGGCGATCTTCTGC
ACCTTGCTGCGGCGGCGCCATTGGAGAGAGGAGAGAGGAGAGAAGATGGAGTCATCTATT
CGTGTCCCTCCATTGCCACAGTTACTTATAGAACGGAACATCGGCGGGATCTTTGTACTC
CGAAATTTTCGTTTTGGATTTGGCAGCGCAGATCGGAGGGAGATTTAGATGGAAACCGAG
CGGGGGAGAAAGGAAAGGGCGCGGGGAGAAAGGAAAGTGCGCGGGGAGAAAGGAGGTCGC
GGGAGGAAGAACAAACTCGCTAAAATTTCGCTCCACCAATGCATGCTATCGGTTCCTTCT
TTTACTGAAGGGGGAGGTTACAAAGCGTTTTTTTAGCGATTGATAGGCGCCCCTCCTTCA
ATTACGCAGCTCCATCGCCTCCTTATTTCCTGCCTATCACAAATCACCTTGGGCCCAGAG
CGACGCGAGAGACGCCCTACAAACTGTGATGGAGGGAGTACTAAACTTGAGGCACTTATT
TAATACTACCTTTGTCAAATACTCCCTCCGTCCCAAAATAACTGTCTCAACTTTGTATAA
GCTCTAGTATAAATTTGTACTAAGATTAAGACACTTATTTTGAGACGGAGGGAGTAATAT
AAAACGTCTTATTTTACTTTACGGAGGGAGTATTAAGGTCGAGAAACTTATTTTGAAACG
GAGGGAGTATACTGCCTCAGGGGATCAAACCCTCTGCACCATAGCCGTTGATTCTACAGC
AAGGGCTATATCAACCACCTACAAAAGTTATGGCAGATCGCCTAAGCACCATTTCATGTA
AATGTGCACATGCATTTCATAAGTTCATAACTATGCAGTGCCCAGTGTGTGTTCATTGAG
TTTGTATCCCTCATGCTCCATTTTAAGCTAAGGAAATCCACCCTTTGTCGAGAAACCAAA
TTGCATCTCGACAGGAAGTTGAACTAAACTGAAAAAAGATCAGTCATATTGTCAAATCTA
ATATTTCCTGCCACCACAAAAGTGTGCCCTCATGGTCTCTCGCAAGTAGCAACAGTACCA
ACCCCTCCCAATCTCTAGCTGAAAAAGTGGTTCCTGGGGAGGCCAACGAGTAGAGATGCT
CTAAGTATCCTGACCATGCAATGGCTATTTAGCTCAGGTGCAATAAAGAAAAGGAAAGAA
AAGCGAGGCCAAACGAGCAGTTACCAAAATGTTTCAGAAGTAACATGAAATTACATATGC
CAGATCTGACGCTTTGCTGATCTGAATCATCATGTTTGCATTGCTTTCTCGACACATTCA
GAGATTCAGAATACAACAAACACAAAACAAGCGTCATTTACTTGCTTCCTTTTCACACCT
TCCATACTCCATCCACATATTATATAACCTCTCAAGAAGTTTCACTTGTTACAGGGAATG
TAACCTAGCCTGAACCTGTGGGGGGCTCTCTCGACACGGCGAACCCTCGCCTGGTGTTCC
TTCTTCAGCAATATCAAGGTTTCACAGAAGCTGATGACTCTAACTAGGCAGATATCGCGG
ATTCATGCTCAGCTTGAGATGGAAATCTCTGACGATTTTCGCTGAGGATTCACAGCCATC
TCTTTGCCTTTGCAGCTGAATTCATCGGAGGTGGCGTTTTGGCTTTTTTGTCAGTTGAAC
CTGCCAATGGAAGTTGAAGCTCTTTCAGTAAAAACTGACGATCAACACAAAACAACTTCC
TTTAAAACTATATACAACACCAGGATTTATTTATAGTAAAATTATATTTCATTGGGCATT
TTCTCCGGCAGAGCTCTGTTTCCCACTTGGTGCATTCTTAAAGTTGCAGTCGGGAACAAG
TAAAATTCAGTTCAAAGCATCAACTAGGAGCTCACTCCTAAATATGAAAAACAAGGAACA
ACAATATACCGTCTAGAAGGGACCTATAGGTTCAGAAAGCAATGACAAGAAACATTGATG
ATTTCTTGGGTTGTATATGTATCAAAACCAATGATTACTGAAGCAATGGAAATGGAATGC
AAACAGCTAAAAGAGAGTTATAGTGGTTTTGGCCTGGGAAGCAAACGATTGGTTAAGAAA
GAATGGAGAATTCACATTGATGTTGTTCAGGCCATCGAACCCAGGAGAATGGCAGTGGCT
TGTAATTTCTGGCGCTGGCAGCACATGCAATGATTTGGCTATTTTGTACACCTTTCATCA
AATGGTACAACATTAGTAACAATTTAGTTGATTACTTACTCCTCTGCACAAGGCAGCCTC
CATCTTTACATATTAAGTATGCGAAGTAAGAGCAAAACAGCATTTTCTTTATCCAGATAC
TTACTCGAATCCGACTTTCCTCCTAGAGATGATCTGCGTGACATGGTCGACGAGGGAGGT
GGGAGACCTGTTAGTGACTGTCTTCTTTTTAACCTCGTGTTGGTAGTAATTGGAGATGCG
CCGTCATTGTTTGCATTAGTTGTGAGTTTGACAGGAGTTGGTTGGGCTGAATGTGGAATA
TTCCTGCAACGTTGTGTCAACGGCAGAGAAAGCTTAGTGCACATGCGGCACTACAATCTG
TACTCGTTTGCAATTGCATACTAATGTATCTTCTGAATAGACTAACCTTCTTTCCGAGCC
ATGAATCAACTTCCCTATGCTGCTCTGAATGGATCTTCTTAAATGTGACCCTCTCTTCAC
GACGCTGCTTGTGGTTGTTTTATCCAATTTGGCATCAGAAGGTTCTTCCGTCTGACTCAC
TTCCACACCCATATACCTTGATCTGCATGGTGTTCTCTGGAGAGTATCCAAACCTGACTG
CTTGTATTGATTATAACCATCAGGGGGTAGTTGATAAAAGGGAACCATATCATCTGTTGT
AGCTATCTTCTCATTCTCATGTCCGACTGGCTCTTCAGATAATGTTGGGGACATCTTTTA
TCACAATGACGAAGAAGGATAAAAGGTCAGTCGTTACATCACCAAACATTATGAAGTTAT
TCAGAGCAAGATTTACCTGTATTACAGATCTGTGGAGCTTTGTGCGATTGGAGCCATCAA
TACTGCACTCCTTATCACGAGCTGTCCCGTGATCTCTGTTGAACCTCATCGCTGAAATAG
GTGACTTTGGTGGCTTTCCTGGTATGCTACTCTTTTCACTACTAGTAGTCTCTAGGCTTA
ACCTACGCGGCCTTGGTGGGGTACGTTCCGGGAGTTGCTTTGTTCTCTCACTCGTTACTG
TATTTTCCTTCAGTTTAAGTGACGATCTTTCAAATTCTTTGGTTGCCAATGCCTTTTTGA
GAGTTTCTACCTGAAAATTACACATTTATCTTATGTTTGTAAAGAAAATGAAATACTCCC
TCCGTTCCAAAAT