Contig Data
morexGenes
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Map Locations of contig_331133 (2579 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_331133

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_48870 1 1625 bp MLOC_48870.1 Available Available LOC_Os05g06310.1, FRAME:-2, EVALUE:3e-27, 13105.m00673 protein 60S ribosomal protein L18-3, putative, expressed





CDS Structure of MLOC_48870






Contig Sequence (2579 bp)

>contig_331133 2579 assembly3_WGSMorex_rbca.fasta
CCCCCACCACCTTTTCTCTCTCTCTCTTAAACCTCCTCTGTGGGAAAAAGATTCGAACTC
CCTAAATTCTGAGGTGACTCTCAAATTGAGCATTTTCTACTAGAAAACTACTTCCTCCGT
TTGAAAATACTTGTCGCACAAATGGATGCTAATAAATAATAAATGTATCTAGAACTAAAA
TACATCTTTAGATACATTCATTTCTATGACAAGTATTTTCGAACAGAGGGGTATATCTTT
AAGGAGTTAACATCACCTGGCCCTTCCACACCATTCCCCTTCCCAAAGAGCAAAATTTTG
GCGCCAAGACATTTCCCTCGCACGTTGGAGTGACATCCAATATTGTTGCAAACGATGGTT
AGGTTGAGTCGATCAAGTGAACAACAGTCCTCCGAGTTGAGCAACACTTAATGAGTATGC
CATCTACATCGAAGAGTTGTACAAGCATATGAACAAAAGAAATAGCAACAAGGCATTCGC
TTTGCCCATTGTTTTCCTAAATCTCAAGGCAAAACGAGAAAATGGGGGAGAAAATTATGA
AACAGAATCAAGTGAAGGTTATGGGGTTTTTTGTTTTTTTTAGGGGGAAAAGCCTCACTC
CTAGCTCTTGCTTGGATGGGAGAAGAGAAAGAGAGCAAGATTTCAATGCAATAAAGACAA
ACGGAGGAGTTGTTAGTCCAACACAAACAAGAGACGATGGCAAGGTGGATTTGTGCTTTA
AGGAGATCGATGATCAAGGCCATGACCAACTGATGGCGGTAGAGAAAAGGAACACATGTG
CGGAAGAAAGTAGATTTGCCCTGTCAAGGCCGAAGTGCAAATGTACAAGAGGAAGGAAAA
CAAGGGCAAAGGATTTCGTGGTAACCTAAAATTACAGAAGACAACTTCTCTAGAATTGTT
GCTGCATTAACTTGAACTGAGGTACCCTAACAACCGGTTGCGACCCTGCTTGTATAGGGC
CTATGATGCATACATGTTGCTTTTGATGAAATTGCATGTGGTGGCTTACTGGATGTTACT
CAATTAATTAATCAGAATTGCATTAAACCAAGTTAAAACAGAAACTTCTAAGCAAGAGAA
CGCAATTCATCAGAATTGCATTACTTCATGCAAAGATACAGCAACTGATCCAAGAGGATA
GAGCCCAAGGCACCAAAGAGAACCAACTACACTGACCATCACGTAGAGAGAACACATTCA
GCAGTAGACATTGCCAGCAGAGAATTCTAAGAGACAGGGTGCAACAAAACATGGTCTTCA
AGCTCACAAAATAAAAACAGTTGACAGCCATAAGAATCTTCCAAAATATCATTCGAACAC
TGGGGCGATAGATTGTGCTGCTCTCAGTACTAAGTACTTTACTAATTACTGTCAATTGCT
CAAACAGAACAACAGCCGCTCCACGCAAACAGCGACTAACCAGAAAGGGCAACTTAAACC
TTGAAGCCACGGCTGTTCCTCCTACCACGAGCCTTCTCAAACTTCCTACCCTTGGAGCGC
ACATAGGGCTTGGTGTGGCTGTGCGGCACACCAGGAGCCTTGCCGAAGTGCCTCACCGCC
TCACGGGCATTCTTGGGTCCCCTCAACAGGATCTGCAGATGCACACATTTGCAAACATAA
GGACTGAATTCAGAACAACTATAAGAACTTGCAAGACAAAGAGCTGAGTGGATTTCTCCT
ATTTTATTTTAAATTTAGAAGTACATTTCAGACTGCACCAACTACATACTGAATAGTGGG
TAATCACGTTCTCAAACTACTCTGCTCAGATATAACTATAACGCTTAGTTCATATCACAA
ACGACCCACAGAGGGAGGTTTTCATAGAGCTGGGATTATAGTGTATCATCACTGCAGTAG
TCACAATCAACCTGTGTTTTCATAGAGCCTTATTAGGTTGCAATGAAATGTAATGAAGAA
ATCATAAGAAAAATGTGAGTGAGTGGGCTCAGATACAAAAGAGAAGTTCATATCAGGACT
GCCCACAAAGGAAAGTCTCATAATGAGCTGGGTAATAGTATCATCATTGCAAAAATAATC
AAGAAAAAACACTGCCACTAAACACTTGCATAAGCAAAGAACACAGAAAGAAAGCCAATG
CTATTTTCAAGTCAAAAAGGAAATGGCATATAGTCTGCTCAGATAGAACTATAACGTTTA
ATTGAGATCACACAACCCACAGAGGGAAGTATTCATAGAGCTGGGATTATAGTGTATCAT
CATTGCAAGTCATAGGCTATAATGAAATGCAATGAAGAAATCATAAAAAAGAACGTTGAG
AATGCTCAGATTCTAAAGAGAAGTTCATATCACAACTGCCCACAAAGGGAAGTCTCATAA
TGAGCTGGGTAATAGTATCATCATTGCAAAAATAGCAAGACAAAGTGCTACAACTAAACA
TTTGCATAAGCAAAGATAATAGCAACAAATTAGATACTCTTTTTAGTACTAGAAGGCATA
CATCACATAGTATAATATAAGTTAGAACTATAACATTTACTCCCTCCGTTCCTAAATATA
AGTCTTTTTAAAGGTTCCACTAGTGGATTACATAGTGATGTATATAGACATACTTTAGA