Contig Data
morexGenes
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Map Locations of contig_328815 (5360 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_328815

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_48735 1 674 bp MLOC_48735.1 Not available Available None
MLOC_48736 4 3979 bp MLOC_48736.2 Available Available LOC_Os10g36680.1, FRAME:-2, EVALUE:4e-145, 13110.m03323 protein ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed





CDS Structure of MLOC_48735






CDS Structure of MLOC_48736






Contig Sequence (5360 bp)

>contig_328815 5360 assembly3_WGSMorex_rbca.fasta
GCAGGGTTCATCCGGCTTGCATGTCATGCGCAGGTTAGTTGCATGGTCCGCAAAACTGCG
CTGAAAGGCTGAAACGACCATGACCTACTCGCCGATAGCACCGAAGCAAGCCATAGGATC
GTTTGCCACAACAGCAGGGTGGCCAAACCCGCTGCATTTGGAAGCAGCCAACAACCATCC
TTATTAATATTGACGCTCTTGTGGCTCAACAAACCAGCGTGAAAGAGTCGGGTGATGATG
ATTCTTCAAGAGGAAAATGGACAAACACAAGAGAGTGATGTTTATTACAAAACATTCACT
ATTGTCGTGTCTGGCATGTGTTTTTACTATATTTAAATACACTTTGATCTAATTTATTTA
TTTCAATATATTTTGTCTTCTATGAACGCATCAGCAACTTCTATATTTAGTGGAAGCCTC
ACCGGAAAAATCATCGGGTTCGGGGTGCTATGTGGAGCTATGTTTGATCAACGTGTGTGT
CTAATTTTATTATTCCATGGTAACGCACGGGCATTAAGCTAGTCTTTCTAACGACTGCAT
GAAGAGTTGAAGACGCAGACAGCCTGGATCAGGGAAGGGTGAATTTGTCTTCATACTCTC
CACCCCAGTTCATACAAAGAGGTTATGAATTTGAACGTGTACATAGTTTCCAAAATAAAC
AGGCTGGGAACATGAGTATTACCTCTGTATCAAAATATAGGACGTTTTTGTAGTTTAAAT
AAAATCCAAAAGTGTCTTATATTTTGGTTCGGAGGGAGTATCTCAACAAGTAACTTGATA
GTACCAAATAATAAAGGGCCTCAGTTTAAGGCCGGGTAAGCGTCTATTTACTAAAAAAAT
AAAGTACCAAATAATGGTGACGGTAATCACATTCCAAGACTACTGACGCTTATTTGTCAG
CGGAGGGAGTAAGAGTTCAACGTGTTGTTGATAGGCACGTCTACAGGGATAAGTTGTCTT
GAATTAAACTTATCCAAAAGTCCAACCAGCAGTTTGCCGTCATGCCGGAATACAGAAAAC
AGCAGCGCCGCACCAACTCACAAGTGGCAGCGATTTCTTTCCTATTTTCTTCGAGCGACC
CACCACCTCGGCCACGTACTACAGTACTCCCATTTATAGGCTGCCCCGTTCCTACTGGAG
CTCCACTCACAAAAGCATCGAGAAACCGACGAGACAAGCAGCCGCAGCATACCAATCGCA
GAGCAGCATTCATCGCAAGACACAGGATGCATCCAGCAATCAGAGCAGCGGGGAAGACGA
CGGCTGCCACGGCGCACGCCCGGTCGGCCAGCTTGCCGCACGAACACCCGCACCCCGTCC
TGGCGCACCTAGACGACAGCATCCACGCGCTCCGGTCATGGTTGGCCAGAGGGGCTGCCG
GTCAGTCATCCGGCATCGCCCTCGTCGATGCCACCCTGGCAGCACTCGGTGAGCTCCTGG
CGCTGCCGCAGGCTGTGGCAGCACTCCACGCCGCCGCGGCCACCGCCTGTGACCAAATCC
TCGAAATGCTCCTTGTGCTCGCTGACGCCTACAGCACATTCCTGTCAGCGCTTGTCACGC
TCAAGCAGAGTGCCGCGGAGCTGCAGGTCGGCACTAGGCGCGGGGACGGCGCGATGGTCG
CTGCATCGCTCCGTGCACACAGGCGGACAGAGAAGGAGCTGTGCCGCCTCGTCACTACGA
TGCGGCATGCCGCCAGGGGCACGTTGAGGACATTGGATGCCAAGAACAGTGAGGTGATCG
GCATTGTGGCAGACGTAGCTGCGGCCACTGTGGAAGCATCGGCGTCCATCGTCATGGGGT
GTGCAGCGATGTCAGCGGACATGCCAGATTTATTTCAGAAAGTGCCTTCAAACAAGTGGC
TGGCCAGGCTGAGCGTCAGGCCGCCCGCGAAGAAGGCAGCACCAGAGACAGCGATGGCGG
CATTGGAGAGGTTGGAGAAGTTAGTGGAATGCATTGACGGGCCGGAGACCGGGAGCGAGA
AGGTCTTCAGAAGACTGCTGCAGTCTAGAGTTTCACTTCTGAACATCATTACTCCCTTCT
AACCTGCAGCCATGCTGCCCCTGTATAGATAGTTAAGATTTTAGAAGAGGGAATAGGAAA
CATGTTAATAGTAGCAGTGACGAAAGTAAAAGAAACATAATATTGGATAACAGTGGCGTA
CTGTATGTAGTTTCAGTTGGAGCAGACTTCTAAGTACCTGTTTTTGCACAGAATTGCCTC
CCTTCATGTCACATTAACCTTGAGCCACCAAAAGATAGTATGTTGTTACAAACTGGAGAA
GGCTGGTTGAATTCTTCCTGTCGGCTTAAATGCAGATACCACCAAGATAACCCGATCATA
ACCCGACACTAAAGCTCAGCGGTAATAGCCTGGCTAAAATCCAAATTTATAAGTTGGGTT
AATGAACTGGTAGACTGACAACTGAAAACACAGCAAATTGTGCAAAACTACAACTTTCGT
CTCTTCAAGAATAGCTGCATTTTGTTCGTAGCCCTCTCGGAAGCATCAGGGATACCATGA
TTTGCATCCCTGTTGAGCTCCTTCAGCTCAGAACTGTCAGTATCAGTAACACTGGCGAAC
TCATTGGTTTCTGTAAACTGGCTTCAATTCAGACCATCCCCAGAGAAACCAGGATATATT
TGACAATTCATATAAGAGTCAAGGCCCTTCATATCTAAAGCTTTCTTCGGAGTTACAGCA
TAAACCTGTTTGATGACAACTTGACATGTTAAATTAAATATAAACTTTGACATGAAGAAA
AAATCATCAAGCTAGAAGGATAAGGGAAAGTATATGCAAGGGTGTATTAAGCACTTGTCA
GTAACAAGAAGGCGAGCAGAACAGATTGAAGAGCATGAAAATCCGGGACCTAACAGCAAT
TAGATGCACCAGGCTTCCTTAGAACAATACAGAATATTCTATCGGAGCACTTGAGTGTAT
ATCATACTTGCCAATGCCAACTATGATATTCTTCAATGGTCCATCGATAAGCCAGAATAC
AAAAGACCTCCAACTACATGTAGTATACAATTGCATAAGCACATGCACCATATAATGCAA
ATCAGGTTCCATCTCAAGTATTTACAGGTGCCTATCAACTTAATCAGGACTTTCAAATTT
CAGAATAAACTAGGAAAAACATGAAGTGGATTTCAGAAAAGCCCAAATAAACATCATACC
AGCAACAATTCAATGATTTCCTTACCTGCATCTACACAATTATCCCACAGAAAGAACAAT
CTGGTGGATAAACTGAAAATAACTGTAGTTGTTGATCTAGGTTAGCATATTGCACAACTG
AGGTCCTTCAGGTAGGCATGTCACAATCAAAACAACAATAAACAACACCAAGGTACTGAA
ATAAAACTCATCACTTAAAGAGATATTAATTATCAACTAAGTGCTCATTCTTGACTTATA
AAACTTAATTGACACAACATGAACTTCCAAAACTTCTCGTCAGGATAAAGATATATTACC
GTTCAACTAAGTGCTACTGAACTTCAGTCTTGACCTACCAACATGCCTAGCTCAGGGAAA
CATAATTAGAGTTTTGAGTATACTGACTAGCATGTTATGCCAATCGACTACCATCCCTGA
AGAAACATCCATCGTCATCATCATATGGATCTGCACCACTAACATATTTGCCATCCAAGT
TGAGCCAAACACCTGCTTAACAGGTTACACTAAACAAGGATATCAATGAATTGCACAACT
TCCGTGTTGTCCTGTCATGCAGCTTCACAGATACATCACACTACTAGAGCTCTAGTTCCT
GTAAATCGGCATCGCTCTCTTTGGCATCGGCACTGGCACTTGAAGACATGTTGGCATTAG
AATTAGCATTCCCAAGGCCATGGCGGCGCAAGAGCATGAGCTCAACAAGCTTTCTTCGGG
CCTCAGAAACATCATTAGGCTCAACAAGCTTGCCACGATCATATCCTTCCCGCAGGAACA
CTGTATGCCGCTTTCCCTTGGCCGAGAGGTAAAATATCCCAGGGTGATCCAAGAATACGT
CCCTGACATTAACATCGATCCCAAACCACTTCCGGAATTGGCTGAACTTCTCCACCTCCA
CCATCTTCTCCACGGTCAAGCTCAGAAACTCGTGTGCAATTCCGACTGCCCTCTTCTCCA
TCTTCCTCCTCGCCATCTTCGATACTCTCTTGCTCGCGCCAACCTTCCGATCCACTACCT
CGTACGGCCCAACATATGGCAGCAGCTGCCAATCCTTCACCTTCTTCCGGTACTCCTTGG
TCAGCCTGAACCCTGGCGGGAACTGCAGCTGGAAAGCGTACTTCTCCGGCCGGTTCTTAT
CCACCGCCGGAGTGAACTCCTCCTTCGCCGGATCCGCGACGAGGTGTAGAACGTGGGTTC
TGGGCTCGGCGGGGTTGGGGGCGAGGCGGAAGAGGTGGGGATGCTGCGCGACGACGGAGT
CCTCAAAGTCGTCGGGCAGAGCGAGCTCGCGCCAGACGCGGAACACGGCGCGAAGAGGGA
CGGAGCGGGATGCGGACATGGCGAGGAGGCGGTGGAGCGTCCGCGCGGCGGCGTCGGGGG
AGGATGCGACGGCGAGGAGTGAGGCGGCAGGCGCGGTGAGCGATAGGGAGAGCGGGAGAG
GGGGGCGGAGGTCGAAGATGCGCGGGAAGAGGCGGAGGAAGTGGAGCGGGCCGCGGCGGT
GGAGGCGGAGAGGGAGGCGGCGGGCGAGGTCCGGGAGCGCGAGCGGCTCGGGCGTCGCCC
GGAGCGCGTCGAGCAGCGGCGACGCCGCCACGAGCGGGAGGCTGGAGGCCACGAGCTTCT
CGAATGTGTGGTCGAGGTGCCGCGCCGCGACGTGCTGCGCCGCGGTGGTCTTGCTGCGCG
CGTGCAGCAGACGCGCCGGCAGCAGCGTCATCGGCATCGGGGGCCTCGGCGGCGGTGCGC
GGCGCGGCGTGAAGCCGCTAAAATGATGGGCCCAAATGGGCTGCAAATGGACACGGCGTC
TTTCTCCAACCAAGGGCTCCATCGCCAAACCCCAAGGAAAACTAAATGTTCACTGTTTCT
AATTTCATTCATGAATTTAGAAGCTGAAATTTCAGAGATTTTCTATTTAGCACTTATGCA
CCGGTTCACAAACGGGCGCCTGTAGGCATCCGTTCACCTGTATGAAATGGGCCGGCTCAT
CTTTATTCGCCAAAGTTCAGAAAAAAAAGGCTGCTACGTGTTACAAACATTTTATTCGTA
TTTTTATTTAACTTCAAGTGTCGCAGAAATCCTTCAATTTTCTTGAAGCTTCCAGAACCT
TCCCAACCGTTTTAACCGATTCGCTGGCCATTTGGGAGGCTATTTTATTCAAGTTTCAAA
TGGATCTTTAAGAGGAAGAC