Contig Data
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Map Locations of contig_325539 (579 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_325539

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_48539 1 216 bp MLOC_48539.1 Available Available LOC_Os01g64920.1, FRAME:+1, EVALUE:2e-22, 13101.m07004 protein nuclear matrix protein 1, putative, expressed





CDS Structure of MLOC_48539






Contig Sequence (579 bp)

>contig_325539 579 assembly3_WGSMorex_rbca.fasta
CATGGTGGTTCACCCAAGGACTGCCGAAAAGAGGGTCATCCATCTCGCTCGCTGGGCTGT
CCCCGTCGGCTCGATCCCCACAGCCCAACCACCACCAAGCCGGCCGGACGCCGCGAGCGG
AGAGGATTGGTTCCCCATGGCATCGAAGCAGATGGAGGAGATCCAGCGGAAGTTGGCAGT
GCTGGCCTACCCGCGCGCCAGCGCGCCCGCGCAGTCGCTCCTCTTTGCCGGCGTCGAGCG
CTACCGCCTCCTCGAGTGGCTCTTCTTCCGGTACGTGCGCTGTGGTCCGGAGGCTGCTGG
GCGACAGATCGCCCTTCACGCAGCAGAACTTGCAGGGGGACAGCCTCGACCGCGACGAGG
AGAACAACAGTTTCTGCCCACCCGTTTCGCGGCGCTGGATTGGGAAATGCTTCGCTCGCG
CCTGGTGCTGGTGGCCAACGCCGACGCCCTCCGATCCCCGCCATTGACTGACGAAACTGA
ATTTTCTGAATCTGACTGACGAAACTGAATCTGACTGACGAAACTGGATGGTGGCGGCGT
TCGGGGACACTGTCGGCAAGAAGTTGCGGCGCTCGGGGA