Contig Data
morexGenes
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Map Locations of contig_324737 (5506 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_324737

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_48495 3 1349 bp MLOC_48495.2 Available Available LOC_Os09g03210.1, FRAME:-2, EVALUE:3e-76, 13109.m00243 protein expressed protein





CDS Structure of MLOC_48495






Contig Sequence (5506 bp)

>contig_324737 5506 assembly3_WGSMorex_rbca.fasta
AGTGACACCGGCTACCCAGAACACGTTNNNNNNNNNNNNNNNNNNNNNNNTTCTCGTTTG
CCAACGCTTGAAAAAAGTACCGGTAAATTTATCCGGTTTCAGTGCAGCAGCAAAACCATT
ACTTGGACCCGACGCATTGGGAGACCTTCTCCCGGCGTCACATCCTGCCCAGGCTCACAG
GATGGCTGCAACAACTGAGGATCACGCCGCCGAAGCAGATCGACGTCAAGTTCCGCGAGG
TGATGTCGTGGACGCCTGTCGTGCGCACCGAGGACATGGTGTCAATCCTAGAACAAGAGT
TTTTCGGCAAATGGGAGAGCGCGCTGCGCCACTGGCTGCTGTCCGCGAGGCCATCGTCGG
GGGAGGCCGCGGGGTGGTGCGCCGGCTGGAAGAACCTCTTCGCCCTGGAGCTGCTCGACG
ACGAACGCGTGCTCGCATGGCTGGAGTCTGGCGTTGCCATGGTGGATCGAGAAGCGGAAG
ACCTCAGCCGCCTTGTTTGTCATACATAGTGATAGTAGTTGATACTGCTCTGCTACAACA
GCTTGAAAGGTTGTACTAGTAGTCACTTATGATTAGCAATGTAATGGTTCTATTCACTTA
TGATTAATAACAATATGACGAGAGAAAACCACATGGTTTTGATCGGATAACGAAAGTATA
CAAAAATGTATGCACTTTCAGGCCCTCCCCCTATGCCATATTTCACACTCAAAATCAATA
CACCATATGCTTGAATGAAAATTTCAAAATACCAAAGGAGTCCAAATTCCGATTTGCAAG
TTTGCGTGAATTTTCGCAGTTCTCCATTGTAGATTTTGTGACAGTGTAAAACAAGGCATA
ACCTATCTTCCATGTTTCGACACTGGTTTGCAAAGATCTCTGCCTGGATGTAGAAGAAGC
TGCCTAAACCCTAACCCTATACTTATCCTATTCCTACGTTTTCAAAATCCTATGAATCAA
AGAGGCCCTTACATGGTGAGGCAATGACATCCTAGGAAACGGAGATGGATAAAAGACAAG
CAACCCAATGCTATAGTTGTTGAGGAGATCGATATGTATTATGTTCTTATTGGCTGAAAG
CCTGAAACACCTTCTGAAGATAGAAAGTCTTGTTTCTCTAAAGTGTATGTTGCCTTTGTC
AATTGATCAAACCAAACATTTTGTATAACAGTACATTTTTTCCTGAGATATCCAAACTCT
GTAGATGAACATATGATAAACTCATATGACTTATGCATTGTCAAATATGTGCTCAACCAG
AATTTGCTACTTCTAATTGATGTGGAGTGTATGAAAAATGCTTAACCAGGCTTTGCATCA
TTGAGAATGCGGTTCATCCAGTGCAGCAGTTTTATTGATGGGCTCTTGTTTGTGATGCTC
CAGGGGGGCATACTGGGTGTGCTAGTGCCACCAAAAAACGCATTTGAAAGTTGCGAAAAT
TCTGAAAAGAACCCATCTTAAGAAATTTAAGAAGGGGTAAATTCTGCTCTAGGTTTGAAT
CGGATACTATTCAGAACCACTTCTTTGGCACAATAATGTGCAGCCAAGATGGATACAAAG
AGAAGGAATCCAATGAACTGAAAGCTGCTACTGAGCTCTTGATTCTGACGAAAATAAAGA
AATAATAGGTGATTAGTTCACTAGAAGACATATTACAGCCCGATAGTCTTCATAGACATT
GAACTTGCAACACAGGCGATCCGATTCTAACACAGGTCTTAAGAACTTGTTACTGCATCT
TGCAATTCAACAAGGCATAGACATGACATCTTAAATAATGGGACCGAGGGAGTATAACTC
TTAAATTTCATGCATGCACCACAAGCAGTTCTAGTAAATACTTCCTCTGTTCCTAAATAC
TTGTTGTTGGGGAGAACTAGACTTGTTCTCTCCAACAAGTATTGTGATACGGAGGGAGTA
TGTTGTTTCAGCATGTACCATGACTTGTTCACATAATAAAGCTTTGCTACATCTGTCAGA
CTGACACAACTGAATAACTAAGAGTTACAGTACATCAGAAATACACAATCGACCAAGTGA
CCTTCAGAAGCATCTTGTAGTCCCCGCAGGTGATATTCTCATCAGTGTAACCATTGCGCC
TTGGAGTAAACTCAATAGTGCAGACAGATAACACATCATCACCGACAACAAAAGCAACAG
TCAACACCAGCATCTCATCCACAGAGACTCCTACTACGCGCCGCGCCATTTGTAGGACCC
CACTGTCACCTGCAGTTAGCGCACCGCTCACTTTGCTATCATGTAGCACAATGTCGCATG
GAATGCTGGTAGTGGAAGCGACAATCTTCCCATGGAATTCATCAGGTCCCTCAAGGATCT
TGATCTCAACAGTGCCCTCGACCGCCCTCCTAATGAATGTATAGTTCAAATCCAATATGC
TGTGCATGCTGACAAGTGTTTCCGTATCAACCACATATCTGGGAGTAAATTCCAGCCTGC
GGATAGCATCCACCTCGATCAGTCCTTTACTGAGTCTATCATCATTGACAGCCCTCCCAT
GCACATCCTTCACCTTCAGACTGATTTCAAAGAATATATCATCGCATACCATGAATCCTC
TCTTTGGGCCAGTCAAAATCAATGAATCATCCTGCAAGACCAATTTGAATAGATAAATTC
CAGGAGCTTGCTTCTGGGATTGATTGGATTACCCTTGCTTTGGGGTTCATTTGTAGCTAT
GTTCTGAATGACGAAACAAGGTAATTAGACTCAGAAAAAGTATGCTACATCTGTGGTCAG
GTATTTTGTGTACTTCCTTTTCTTATTGTGCAGATTTCTGTAGTGCCATAAGCTGAGGCA
CACAAGTGATAAACCCCTGGCTCCTATCGTTAAAATCAACATTAGATGGAACAGGTACAA
AACCAGATCCGTTATCCAAGTATAACATACAAAACCCAGATATGGATTACTGATATTAAA
CATTCAGAAATAATCATTTATAGAAATTGTCAAAAATTCTCTGTCAGGAAATCACCATTT
TTTTGTAAATCAGAGGACTGAAATGAGAAAGTACCAGTACAAGAAAATACACATTGATAT
ATTGTTTGTGCCTGTAGCTATGAGGCAAATGGCAGTAATACCTTTGAGCTGATGAGCTGG
CAATCATCCTGGTCGCGCCGGAATATATAGACACATTTTTGATCCAGACTGTCCCTTGCT
ATGATGGTACCGTAGACATTGAGTGGGTAGCCATAGTCGGAGGAAACAATCTTGATGGAG
ACAACATTGACCGAGTTTTTGAGCCGGAACCCCTCTTTGAAGATTTTACCAGTATGTCGC
ATGGGACCAACAGGTGCTGTCAAATGAGAAGAAAATGCATATCAATCAATCAAGGAGAGT
AACAAGGCGAGTATTTATGTAGGTGTAAATTGGTTGGAACAGACGCACTGAAAACCAAAC
CAGGCAGGCTGTGATCTCATCTTTTGCGTGGTAATATATACTATCACCTCTGTTCTGAAT
TAAAGACTGTTTTTGATATTTCAATACGGCCTACATACGGACTAAAATGTGTGAACAAAC
ACACTAAAACGCATCTATATAGTGTATACATCCGATTCAGAAAAAGGTTAGAACATGTTA
TAGTTTGGAACGGAGGGAGTAGTGATTAAAACTAGTGTGCGTCCAAACCGAGCCTAATTG
ATGGATGAATTTGAAAGTTGCAGCCTTTGCTTCTGAATAAATCTAGTAGGAGGTGAAATT
AACCTTCAGATTGATTTTGAGGAATGAAGTGATACTGACTGACCTGCTTGGGGATTTGTG
AGTGGACTGGGGAGGGTTAAATCCGCTGATGCATATTAAGGGGGATTGGGTTGGATTGGA
TAGGAACGTACACTCCTCGTCGAGGTCGAGTTTGTCGCCGTCGAAGAAGTAGCGGACGTA
TATGAAACAGCCCTGCTTGGGGTCGTACTCGCTGAATCGCGGGTCCAAGGAATCCTCGTC
CGGCGTCTCGAACCGATACTCTTCGTGGTCCCACTTTCTCGCCGCCACGGGAGAAGAATC
GCCGCCGGCCATGGAAGGACGAGTCGGGGAGAAAGAGAAAAAGGAGCCATATCACATCAC
AACTTGGGCCTTTTAGGCGCGTGGCACACAGGTCAGAAGCCAAGGCCCATTCACTGTGTC
GGGCATCTATCCGTTGTGAATCCATGGGCACACGATCTCATCACGGACGAATCTTATTTA
GCGCCACAAACGCCGGTTTATAGGCAGAGCTCGGTCCATGTTCTCTTTTCTTAGACAAAA
AAGGATCCACGTTATTGTAATTCGAACCCACAACCTATCGGTCAATAGTGCGATGGCGTA
ACCAATACATACGCGATCTCATCACCGATGAATCTTATTTAGCGCCACACGCGCCGGTTT
ATAGGCAGGGCTCGGCTCATGTTCTCCTTTCTTAAACGAAAAAGGACCAGCGTTATCGTA
ATTCGAACCCACAATCTATCGATCAATAGTGCGATGGCGTAACCAATACATACGCGATCT
CATCACCGGCGAATCCTATTTAGCGCCACAGGCGCCGGTTTATAGGCAGGGCTCGGCTCA
TGTTCTCCTTTCTTAGACAAAAAAGGACCCCGTTATTGTAATACGAACCCACAACCTATC
GGTCAATAGTGAGATGGCGTAACCAATACAGCACCGTAATGCTTCGTGGCCTATTTCTTC
TTTGCTCTTACTTCCTTTCCTTCTTTTTTTCTTTTTTCACTTTTCACTTTTGTATATTAT
TTTTTTCCGTTTTTAATTTTATTCGTCTTTGTTTTCAATTGCACGAACATTTTATCAAAT
TTGGTGAACTTTTAAAAATTATGAAGAACTTTTTTTTTTGATAAATTATGATGAACTTTA
AAAAAAATGGATGAATTTTTACAAGTTTAATGAACTTTTTTATAAAAGTCAATGATTTTT
TCAAAAGTAACGATGATTTTTTTTTCAAAATCAATGAATTGTTTTTGAAAATTTGTGAAC
TTTTTTCAAATTCAATGAATTTTTTTTAAAAAAATGATTTTTTATAAATTTAGATGAACT
CTTTTTCAAAATTGATGAACGTTTTTAAAATTCGATGAACTTAAAAAAAATTATTAACAT
TTTTCAAATTTGATGAACTTTTCTTCAAATCAGTGAACTTTTTTTAATCCGATTGACTTT
ATAAAAAAAATATGAACTTTTTTAAAATCTCATTTTTTATTTTTTATTTCTTCTTCTTTC
TCATTGAAGTTAAAGGTTATTGGGCCGGCCTAGTATGGGGCGCTGACGCGCCACGAGCGG
GAATGGGCGCTTGCAGCGCCGTATAGGACCACCCCTCACCATCTCATATTTTGCTAGTCT
CTTCGGTACCGTGTCTTGCCCATTCACACCTCGAAGATCGATGCAAAATTCGTCGGTGCA
TCCAACCCCGTGACATGATACGCACTGTCACACATAATCCTCCTTATATCTTCCTCAAAA
GAGCCACCATACCTACCTAATATGGCATTTTCATAGTCATTTCGAG