morexGenes - Barley RNA-seq Database

Contig contig_323318
Source Contig contig_323318
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_323318 (8666 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
No map location
Predicted Genes from contig_323318

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_48422	5	4399 bp	MLOC_48422.3	Available	Available	LOC_Os06g19400.1, FRAME:-2, EVALUE:0.0, 13106.m02067 protein GRAM and C2 domains containing protein, putative, expressed
CDS Structure of MLOC_48422

Contig Sequence (8666 bp)

>contig_323318 8666 assembly3_WGSMorex_rbca.fasta
ATGATGTCTTGGAGAAGATTAACTATGAAGATATAATTGAAGATTTCATTTCAAGGAACA
CAAGACGAATGACACTTTTCAATAGAGCATGAGGTTAGTTTATTGGTTTAAGTATTCCAT
ATTGATACTTGAGAATTTTCTACGCATTGTACGAAATAACATAAATTTTAATTACATAAT
TAGGTGATCATGCTAGTGTTATATTATGTTTTTTTAAATGTTAGGGCCCCATTTTTCTTT
TCGCACCGGGGCCTCGAATTTCTGGAGACGGCCCTGCCTATATGATTAACAAGGAGTGTT
TGATGCCATAGGAAAAACAAAGGAATTGTAAAAAGAGGTTGAAATGGATGTTAGATTTCC
TATGAAATGTAGTACAAAAGATTTCATAGGAAAAAATCCTATGGATCCAATCCTATGAAT
CAAAGGACCAATGTAGGAAAAATTCCTAAGGATTTCAATCCTCTAAAAATCCTATAGAAT
TTCTTTGAATCAAAGGAGCCCTTAACCTAGATCGGATAGGTATGTCGGTAGGGGTGTGAC
GGCAGCAAATCTCGTAGTCCGTGCCCCGGCACCCGACCATCCTTTATATAGCACGGGTCA
CAGGGGCCCACCAACCATAATGGGTTGGACGCCCCCGATCAGGACGCATAGATCAAGGCC
CGATGGGCCCACGCGGTGAGAGATCAACCTAACACATTTGTCATACAGAATTTTTACTGA
GCCAAGCTGCTGAAACCGTGGTTGCCCAGAACTCCTGTGAAACATTTGTTCTACTACTTC
AATTTTCCTTTTGAGTGCAAGTGATGAAAAGAATGTCGATTTGCCTACACTATCGAACTA
CATTCTTGGCCCCGCTGTCAGTTCCCAAAGCTGAATCCTGGACTGGGGCAAATTCTTGAG
GGCGTGTGCTGTGATCCGCCCTTTGTGGAATCATCTATCCTCACTATGTACAATCCTTCC
TCGCCGGAAATCAGAATCGATGAATGCATCACCAGAAGATGTTTTCTGGCGATCCATATG
TGTGTGCACCAGCAAAAACATGATGCAAAAAATGGCTCCTAATTAGCTGGTACGAGTTCC
TTCTCAAGTTGGCCAAATATCTTCTTGAGGCGAGAAGACAACTTCGATGCCACCTCTTGC
GTGATCTTCTTTCGATTCTTGCAGCTCTTTAGCCATGCCATGCCAATAAATACTTGGACA
CTGCATGACTTCTGCTTGGACGAATTCTGCTCCAACTGGTATCGAATATGGAGCTGTTGA
AATTAAGTAATAGCTATGTGAGAAGTCAAGAAATCTGAAAAAAGAGAGACAAAACTAATG
AACTAATGAATATGGAGTTGTGACAAAATGACTGAGAAGATAGACAGTTGTTGCCTTTGA
CAAAACTAATGAACTAAACGTGAGACTACCTTTTTCCTGTTTAGGTGTAAAATAATACAT
ACATGTGTAAACAATGTGATTGTTTTGTATATTTTGTACCGACAAATTTCTAAATTCAGG
ATGGCCACTTCACCACAGTGACCACTGAAATCTCGTTGAAAGGTTTTCAGTTCAAAAAAA
TAATCTTGTTAAAAGCCACGAACCCAAGCAACCAAGATATATGCGCGGTGTTATGTTAAC
CACAGAGAAAAAAAAACAGGGCATACAAATTCAAGATTATCAAAGCTAACAAAAGATCGA
TTGCTTGACTACAAAGATGTCATGTCAACAATCAAGAGGAAGATGTGATCAAGAAAGCAA
CATAAGAAGAGCAGGCAAGAACATGACAAGATAAGCACGATATGATACCATGCATAATCA
AAATCTATAGCTAATACTAAGATTTTAATAAAAATTAAAAACATTATAATACCAGAAAGT
TGTTTCTTACATTGAAAAATTCGCCAAGTGGGATACCTTCAAGTGTCATCACTTCTTCAA
CGAGCCATCCATTCTTATCAGGCAATGGGCACTTTTGTTGGGTGCTCATTACTTCCCCCT
CACGGCGTGCCACTTTCTTGTCAAGCCTGTAATGGACTTGTCTCTGGTGCACATCAGCCC
TGACTGGTTCCCATGCTGTCACAGAGTAGTCCATACAGCCAACTTTCTCCATAATTCGAC
GCTCCACAGGACCACCCTCAAATATGCCCATGAGTATTGGCACCTGGATGAAACATGGAA
GTTGCTTTCAATGTAAAGTTGTAACTGTTTCACTTGTTGTACATCACACGGTGGATTGTG
CATCATTGTCAGAACAAGATAAGGACTCTTACGTCAAAAGGTATTGCAGATGAAAATACT
TCTGACATTTTGACATCCTCGGTGCCTAAGAAAGATCCACCTTCTTCATTTTGGAGGTCT
TTCGTTTCTGATTCCTCTTCTACCAGCTGAATTTTTTCTTCAGGGGTCAAAGACCTCGCC
TTCCACAGTGCTATTATTGTTCTGCAAAGCATGCAATTCACAATTTTGAAGAACATGCTC
ATGAAGAAAGAAAATTAAACCGGACAGTAAATTGGTGTCCCTTCAAGTAGTTTATTGCGA
TGGCTAGCCACATATGATGAGTCAATGTTTATCATCCAAGAAAACGAACTTACTTATGTG
CTGCGTTGAATGACACAAAGGATTGGAGATGAAACTTGAGTCTCCCTTCATCGTCCAGTT
GCTTTGCTCCATGCCTCGCATCCAATCCTCTGCCCTTGCGAAGAGTAATCAGCAGAGATG
GGCTTCCCATCGAAGATAGAGTTGCAGGAACCAACTGGATCTCTTCAATATCTTCCCAAA
GAAAGAAGAATTTTGTTTTATGGCCGAAAAGATTGGTGTAGAACCCAATAATTCTTGGGG
ATAAAAACAAGCGACCCTGCAAGACAGCCATGAGCATAAGCAGTCAAAGAGAGTCACACA
AAACAGAGGTTTATATGTCTAATTAAAGTGTAAATTCAGATTAACAGTATCATGGCCATG
CAAAATATGACAATGATTACTGGTAATCATAAGTATGCTTAAGTGGTTAACAGACAATAT
TTGTTACCTTTTTATGGCTGTTTTAACTTTTAACTGGGTTTAGAAACTGAATAAGTTTCA
ATGGAATCTTTGTACTACATCACACTGGCTGAAAATTTTGACCACCATCGGTAGATTTGC
ATATTTTTGTAATCTGGAATGACAGTTGTGCCTATTCGGTATCCCAGCTGACTCTTTAAT
TTGAGGATACTGAATCCACTTTCTCGGCACGTGGTACTGTATCACGAAATGAATGAGGGC
TTGCTTGCATTACAACAGAAACACAGTACAAGCAAATAAATTTACCTGTGTGAGCATCTT
GCGCTTTAAATGGCAGGTAAAATCATTGATAAGGAATTCTTCTGGTGGCAAAGCAAAGAT
CTTCTGGAACTCTAAGTTTGTGTGAGGTGACCGCATAGCAATCTGCATAATGAGATTGGC
ATCAATCAAGTCATAGACTGATTATATGATATCATATACACCTATATTTGGTGTGCACAC
TTGTGAATTTCAAAATTTCTCACTAAAATTGTAGACAGGAGTTGCATGTGACAAAAGAAA
CATAATTAACAACAAAATAAGCATGCAAACTTTGGTCTTTTTGGTACAGTGCACATGTGA
TTATATTCTTGTAGAACTTTTAGCAAGTGAACATATTCCAAGTTTCTAACATGCTCGACA
TTTATAAATTCTATGAATGTACACAATTGTAGTACTATTTGGATGATAGGCTCATATGGT
CCTAAGAGCATGCTTTGGTTTTACCACTTGATGATAGGGAATAGAGACCTACCTTTCTGC
CAACCTCTTTCTCCATCCTGTCCAGGTAATCCTTCACAACTTCTGTACCCCTTGAATTGT
TCAAGAAAATTCTTAAATGCAATTTTGACTGACATGCTTGAGCCAGCTTTCCCTTGAGAG
GAATCCAAATGTCGGCAAGCTCAGATATACTATATTTCAAGAAATTTATTTCAACGTGAC
CAAGGGAGGCAACTTCATCAAAAGGTCCATCAAAATCATATACGTTTATTTCCATCACCG
AGGGTGGGTCTTCCATGGCATCAAATTCGAAAATTTCTGCACATTTCGAAAAGGTTATAA
TGAAACCTGACCACTTGAAAGACCTAAAAATACTTACAAATAAATAGAGGTTCCTTTGAT
CCCAATAATACATTTTGGTTACTGGGAGTTCTAAAGTTTAGCACTACATGAATTAAAGCA
AAATGACAGCAAATGTAAATAGGTCAAATAAAGCTGGCTCCAAATGAGTTTCTAGCAAGT
TATGAGATGGCTAGCAAATATTGCAAACAAAATAAATTATAGCTTTACCATTCCACTGAG
GCTCAAGAGTGTGAAACTTAATCGAACTTGTCTTTGTCTGTCCATTGCAAGTAAATACAA
CATATGGATCAGAGTAACCCGATGACTTTGTTGCTGCTAAGTTGGTCCCATCTATCAAAG
CAACAGTCAGCAACCAGCCATCGCCTTTTGCTTTGACACCATGATCACCGCCTACACATT
CCAGAAGACCATGTAAGCAAAGTTTGCTCTTACGTGCAGATTATGAGAGTATATCTCCAG
ACTCCAGGCCGGGGGCATTCCCTCCTTTTTGAAAAAAGAAGAGAGTATATGCCCAGAATA
ATAGCTGAAGATTCTGGTGAAGAAAATAAAAGGTAACAGTGACCTTGTTTTATCAGAAAA
TTCCTAAAGAAGCATTTGTATCTTGTCATTGTCAAGTGTCAAGAACTGTTGGGTCTATCT
GCTGAAATTTTATTATTCACACTTTCACAGTGATTCTGTTAAATAACACATGAGCTCATG
CATAATGCTTCTATTCCTACTAGGAAAAATAACGGGAGTAAAAGCGGAAAGGAGATATGA
GCTACCTCTTTGCCTCCTTGCCTGGACAAACCGTGCAATCATATTAAGGACACGTTGTCC
TTGCAGAACAAGAACTCCACAAACCACAACTTCACCAACAGAATCCGGCAAGTCTAGGCC
AGGGAACTCGAGACCTTGAATTACACTAGGACTTGCAAGGATGATGTGTGCAAAAACATA
AATTAGCGCAACAACTGAGGATACAACAGTAAAATTTCCAAAGATTCGAAATGCTAGTTT
CCAGTCGGATTCTGTTTCCGGTTGCACGGAAGACAAGCTTTCATTATTTGTTGTTGTATC
TTTTGCATCAACTGGTCTGACATTTTGAGCCAGAAGTTCAGAGACCTGATTGAAGTTATC
CTTCAGTCCTTGTTTTGCACCATTTTCTATCATGCCCTTCATCATGGTACTTTGCATGAA
ATTTACGCGCCAAGAGATTACAAGCTGTGAAGATCTTTCATCATCTCTTACTTCAGGCCC
TGGCATTATACAGGTTAAAACCTCCACCCTAAAATTATTGCCAAAAGGGACCTCAGGAGT
ACTGACATCTGCTAAAACTGCATACATATCTCCATCTGCCTTCAGATATGTCACGTCTTC
TGTTGCTTTCACGGCCTTAACTAGTTTAGTAGCAGCTTTTGTGTAGGTTATAACCCTCTT
CAAGATCTCACCATCATTTTCAAGTCTCCACTGTTGAATATCCAAACCAGTAGTTCCTTG
CATCTTCGCTAGTGATTGCAGTATCTCTGAACTTGGTGAGAAAATAAGTGCGTTCAAGTC
ACTGGGTGCAACAGCATAAACTTGATCGATAAGAACTCCACCTGACAAATTTCCAGGCAT
ATCATTGCCTTCATGCTTAGATGCAAAGGCTTTTAGTAGTTCATCAAACGACATATTTAC
GCTAGTTTCAGAGTCCTGCTCATCAGAAATTTGTGCGCTTGTTGATGGCATTTCTTCAAG
AGTATCCAAACCACGGTCGTGCTTGAACAGAGGTGGAACAGAAACTTCCGTGTCTTTTGG
TTTTACTGAAAAGATTTGTTGCAGCCGGTTGACAAATGATGGACCAACATTTGATTTATC
CTCCTTGGTGATTTCTGCTTCATCGCTACGCGGTGGCGACGCGGATATTTCTATAGGAAT
ATTTGGCAAAGAAGATCCCTTCCTTAGTTCACTTGATTTGTCTGAACTTGATGCAAAGTC
GTCTGAAGCCCAATGCGCAAGTGTCGCTGTCTCTTCAGGGTAACTTTGAGATAGAGATAT
AGTGAGATGAATTTCTCCTACAGAAGATGTTAGCAGCATGTAAATAACCGCCCACAGTGA
AAAATAGGCAGTAGTCTATGCACAAAAAAACAAAGAGGATAATCATGTCGGTCGGATAGG
CACTGTTTTTATTCACCTCATTACAAGCCAAAATAGTGAATACATTATTTTTTGTTGAGA
TTAAACGATGGGGAATGAGTGATGAGAAGTCGATCAAACTAGTGAACGGTAATATTGATG
CTAATAGAAAAAGAGTCCCCGCGGTTTAGTTTCTTATAATTCCTAATAGTTTGAGTCGTT
AAATTACATCATTCAAGGGTTAAACAGCTGATAGTGGGTTGGAAGCTAAGGATAAGTTAA
AAAAAAGGCAGTAAAGCTATGACAGGTATACATCCACTACTGTGTTGATTATGTCAGAAG
TTTTGGATAATCTGGGAAGTAATATATTCCCAGAAGTGATAAGGAACTGCTAACTGTTTC
ATAGCCCAACGGTGTGGCACCCTGCTCCTCAGGAACCAACTATAGATTGATTCATAGCAA
CCGCGGCTGGCGGGACATCCGTATGAACTTTCCCTATAATTTGCCAGATTTGAACTCATA
ACCTGTTGCTTGCGAGATTTCAGATGAGCACACAATTAACTAAGAAAAGAATATGAACAA
CATGATGCGTGGAAAGGTTACGGAGAGAAGCTGTTGGCGAAAAGAGGATGCAGAAAGGAG
GGTTAAACTAGCACAACCCCATCTATCACAACGCTGGATCGGTCACTGTCCAACTAACAC
GAATTCAGGAAAACAACAAGACCACATTATCATCATCATGGAACAACTATTTAACTAAGA
AAAGAATAGGGAAAGAAAATGATGTGTGGAAGGAAGATGGTTACCACAATCTCTGATCTT
GGACTTCTTGCTCTTGGGCTGCAGCGGGTACCAGTGCGTGCCGAGGGAGCGGTTGTCGGC
GTCGAGTACGGCGGAGAGGGGCACCCTGAGCTGGCCGAGGAAGTCGTCGGAGAAGTACTT
GTCCTCGTCGGTGACGCGTATGAGGAGCTCCTCCTTGAGGTCCCCGACCCGGAAGGCGAA
CTCCTCGTCCCACACGGGGTTGGCCGACTTCCTGATCACCTTGGTCTTGGCCCGCTGCCT
CCCCAGCTGCAGCTTGGCGTACGGGTCGCCCTGCCCCTGCGCCTCCGCCGCCGGGAGGTT
GCGGGCCTCGATGACATGCACCACAAGCCTCATTTCCTCCTCTTTTTATGGTTGTTGTCA
AGATTGATTGATTTGGGCGGTCTGCGTGGTTCAAATCAAATCAAGAAGCTTCAAGAAACT
TTTTTTCTTTCCAATTCAGACTGAAAGCAGCTTCTTTTTTTGGAAGGAATTCAGAAGGAA
ATCATGGTGGCGTCTGGGACCGAATCAGAAATCAGCGAGAAGTAGCAGAAGAAGTCGCTC
GCTTGCTGGGTCGGGGAAGCGCGGGAGAGAGCTGAGACCACATGAAGCTCCGAGCCAAGC
AAGCAAGCGAGCAAAACGAATCAAACAAATCCAGATTGAAGCGCGGCGAATCCGGGGACA
ACGACGGGGCGCTTTCCAGAATGAAGCAACAAAAAGGAAGGGAATCCCCCGAACCGAAGG
ACCAGGGGGAAGAAAATCCAAGAAAAGAGACGGCGGTGAGCGCCGCACGGACTGGGAGAA
GACGGACGGCGAGTCGAGTAGGGGCGGGCTTGGCTTGGCGGAGAGCGGGGTGGGGTCCCG
GCGGCGGGGGGAGGAGGATTTCTTGGGGGAGGAAGGGAGGGAGAATGGGCGTTGGGTTTG
GGGCATTGAAGACTTTGGGGAGGGAGAAGAGGAGATGGAAAACGAGGGAGGGATTTTGGA
GAAAAGGAGTGACTTCACTGCCCGCGTCGCCTCCCTCCCTCCCTCTGCTGCTGACTTTCA
AACTACCGCACAGCCCCCCGCAGCCGCCGGTGAGGTCGTGCGCGCATCGCCCTCCTTTCT
GCCCCCTCCATCACGCCCGTTTTACCACGACCATCATCACAGGTATGCAAAAAGGAGCCC
ATAAAGTGTAGCCTTTACTCCCTCTGTAACGCAGTGCTTCTGTCGTCCGTCGCGGCATTT
TTAAGTACCCTTAAATTTTTCGGTATTCAACCCGCGGTACGTTTTTAAGTGATACAAACA
GAAAAACGTTTTGTTTTTATAGAAATGCCTCTGTAATTTTCGGAATTCAACCCGCGGTCC
ATTAAAGTGCTTAGGTTTCGGCCGCTTCCGCTGCTGCTGCTTCTTCTCGATGAAGTGGAG
CGAGAGGACATCGCTTAGCGAGCCGCCGACCGCGGCCTGGAGGAACTCGCCGTCGCGGCG
GAGCACGCCCAACACCTGGTCTAGGGCCCCACCACCTCCTCGCCCCCCGCTCCCGCCCCG
CTGGTGCGTCAGGCTTTGCTTGTTCCTCTCCCACCACTTGTCGTTGTTGCTCCACCGCCG
CTCTTCGCAGCACACATGGGCAGCACGACGGGCCGCAACAGCAGCGACATCGCATCTGCT
CCGTGGTGGCAGAGGCGGGCGGCGCG