Contig Data
morexGenes
Links



Map Locations of contig_319520 (4059 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_319520

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_48207 3 1918 bp AK369711 Available Available None





CDS Structure of MLOC_48207






Contig Sequence (4059 bp)

>contig_319520 4059 assembly3_WGSMorex_rbca.fasta
CACGACCGCCGCACGAAGCCCTCCGCCCGGCTGCCGAAGTACTGTTCGCCGCCCGCCNAG
CTCCTCTTGGCCGGCCTCGAAGCTCTTTTCTTATCACCACCGCCGTCTGGAGGAGTGTTC
CGCAGCCGTACACAACCGTCTGCAGCCGTCAGCAGCAGCCAATCCAACCAGCGGCCATCT
TCTTCCATCGCGCTCACTAGGTGTTCGACAGAATTCCCCAAGGTAAAAAAATGACGAAAC
TTGATGATTTAACTTGGGATTGGATAGTATGTTTGACGATGGTTGTGTGCAATGTAGATG
AGCTCGGTTGACTCCTCTTTCGTGGATGATTCATCGTCGGACGAGGAANNNNNTTTGCAT
GAAGAAGAGGAGGTTGCTATGCTAGCGGCCATGCGCAAGAGGAAGAAACCGAAGCACGGT
GGTTCCGTTTATGGTCGTGTGTTCATTCGGAGAGAACGGATTGATGCGCACAAACGGTTG
NTGCGCAACTACTTTGCATCATCACCTGTTTTTCCTGAGAATTACTTTCGACGCCGTTTC
AGAATGTCGAAAGACTTGTTCTTCCGCATTTGCAATTCCGTGAAGCAGCATAATCCAGTC
TTCGAGCAGAGAAGGAACTGTGCTGGGTAGCTTGGCCATAGCATTGAGCAATGATTTTTT
ATGTTGATATTGTGGACATGAATTTTTTATGTTGTTTCAAAACATGTTTTTATGCAATAT
GTACGGCTATACAGTGGATGGACGGCGGCTGAACAGCAAACGCGCGGCTGCTGGCTGGTT
TTGGACCATGAATTTAGACCATCTATTGAAGTTGGTCTTTTGAACCATGAGAATTTGGAC
CATCTGTTGGAGTTGGTCTTTTTTCGAAGCTCCAAAACACATTTTTTGGCGGTTCCAATT
TTACATCTTCGAATTTGGACCCCAAATTTGAACCATCTATTGAAGATGCTCTTAGCTTTC
TGGATATTTAAAAGCTCTATGCTGCTTCTTTTTTTAATATCTTGACGAGAAACCAAAGAG
GCCCACATGGGCTGTTGTGCGCTATCCTTAAGCATAAGTTTGGGCCCAGCCCAGCAAACA
GGGCAGGGGCAGCCACCGCCTGCCGAAGCCGAAGCCGAAGCCGAAGCCGCTACGCCGTGA
AACTTGTACAGGGTCAGGGTGTTGCAACCAAACCGGAGCCGGAATCCGGCGGCACCTCCG
CTCTCTCCCCACCGCCCCGAATTCCCCACAGAATACCCCGTATCCCGGACGCACGCATCT
CCAAGCCCGCCGGCCCGCGGCGCCCTCTCCGACGAGTAGGCCTCTCTCCACCGCCGCCGC
TGACCTGCCTCTCATCTCCTCTCCTCTCCCCTCCCCTCGCGCGCGAACCCCGCCTCCCCC
CGGCGAAATCCTCCCTTCCGCCACCATGTTATTGGGCGCCAAGGTCGTACCGCGCGACAA
GGCTGTACTGGTGAGTTCGCTGGCATCCCCTACCCCCCACTTCTCAGCCTGCGCACGGGA
TTTGATTTGATTTGATTTACTCCTTTCTCTAGAAGCAAGGAGGCGGCGACGGCGACGGCT
CGGGATCCGACGGCTCTCCCGGGAAGGTTCGCACAAGGCGTAGCAGCGGCAGCAAGAGGA
GAGACAAGGAGGAGAAGCGGAGGCGGAGGCACCGGCGGAGGAGCCGGCGCAGGTCGGACA
GCTCGGAGGAAGGGTCGGGCGACTCCGTCGACGAGGAGGAGGAGGAGGAGCTGAGCCGGA
GCAAGCGCCGGAGGAAGCGCGGCCGCAGGGGCCGCCGCGACTTCTCCGACGAGGATGAAT
CCAGCGCCGAATCTGATGAAGGGAGAGGTAATGATAAACGTGGTGGATTTTGGTCAGGTG
CTAGGTGTGCTTTGGTCAGTAGGATTTTTCTGGGTGGACCGTGCTTAATCGCGTGGCATT
TGCCTGTGCAGGTAGCGGCAAGGGGAAGCGAGGAGGGGCTGCAAGTAGTGATGATGATGA
TGAGGATGAAGAGGAGGAGGAGATGGGAGGTGACGGGACGAGGGCAAGTGAGGTTGTCAG
GAAGGAGATGGGGCTTGAATGGATGCTTAAATCCGCAAGCACCAGTCAGCCGGAGGGCAG
CCGTGCTCAGAGGGCTGATAACGACGAGGAGAAATTTGAGGCTACACATGAAGAGGTATA
TTTACTTCAAAAAAACTGGTTGATGTTCATGTGTGTTCAGTTGATTATCTCTTTTTTTTT
CTTCAATTATTGACGATGACAGGTGAAGAAACCTAACCCGAAAGAAATGAACCCTTATAT
GAGGGACAATGGCAGTGGCTATCCCGATGAAGCCACCGCCGCAAAAGCAGCCAGTCAGTT
GCTTGCGTCCTCCGTTGTTGGTGACGGAGGTGCTAGCTGGCGGCTTAAAGCTTTGAAGCG
TGCAAAAGAGCAAGCAGCTCGTGAAGGTAGAAAGATTGAGGAGGTGTGTACATCATCGCA
TATGCTTATTCAAATACAGTTTTAGTTAGCTATTCTCTAACTTGCAAGGCTATTCAATTA
CTGCAGGTAGTTGAAGAGAGATGGGGCTCATTGGGCCACTTAGCCGCATCAGTATCAACG
TCCAGAATTGCCCCTTCTTATGCTCATTTGCAGGCCATTAGGGCTAGAAAAGCTGGACAG
GCAAACAACTCCGAGAAATCCTCCAAAGTAGATCAGCAGGAGGATCAGCGCGGCGAAGAG
AGTGGTGGTGGTCGCCAATATTTGCAAGGTGTCTCCTCTCGGGATCATGCCATGAGGAAA
CCCAGACCGGATTCTGTAACTTGGAAGAAGAATAGACAGAATATGTCTTCCGAAGATCGA
ACGCTCATCTCGTCTGCACTAGCAAGTATCAATAAATTTTCCAACGATGGAAGCTTTATG
GATAAAATCAGTAACCATGATAGTAAAAATACAAATGCTTCAAATGTCGAGAAAAGGGAT
AGTGAGCAGAAAGCCCACCAGGAGAGTTCAAAGATATCATCTTCAGTGAGCACACAAAGG
CAGGAGAGTTCAAAGATATCATCTTCCGTGAACACACAAAAGCAGGAGAGTTCAAAAATA
TCATATTCAGTGAGCACTCAAAAACTAAATGCAAACCAGTTAGCTGCGAAGGTTCTGCAG
CTCCGAATGAAAGGCAAGCACGAAGAAGCTGACCAACTTTCGGTAAGTGTCTCTATTGTT
ACTGTGAGAAATTGACACACTCTTTCCCCAGTTCATTAGCAAATCGCTAGTTTGTGAATT
ACAAAATAAAAGTGATAACATTAATCCATTTGAATCCACATAGAGCCTTTCCAACATTTC
CTTCACAATTATGCTGGCATAGAAATTTGGACTGTGTATATGATTAACCTACGGTTTAGG
ATACAGTGGCTCTATCAATCAAATTTTCTTGTGCTTTCGCACACTGCAAGTAGAGGTCAC
ATGAGTTCTTAACGGATAACCTTTTTTTCTCAGAGAGAAATGGAGACTGTGCTGGAAAAC
CAGAGTGCTTCTGTTGAAGAGCCTAGGCATGTGAAGGAAAATAGCTCAACCAGGTTTGTC
AATCTTATGTTAGAATTCAACTTACTAGTTGATGCCATGGCTGTCTGTTACCTATCCTAA
GTTGCGAGTTACATTCTGTCTGTTGCTTCTGTTTTGAAACAAATTTCGCTTCTGGGAGGT
TAAGATGCTAAAATTTCTAAGCGGCATGTGCATATTTTCATGATTATGTTCTACTTATTC
TCTGTTCAGTACTCTTGAAAGGAAGTGCCATATATGCCGTTTAAGACATGTTTGGTTTGT
GATGCCCTACTTGCCTTTTTTGCTTTTGGATGTTTTAGCATTTTTGTCTGTGATGCTTGA
TTGAAGAAGTGATGCAACCTCATGTATTCAAACATACCCTTGTTGTCATTCTGAACTACT
TCCTCCGTTCCTAAATANAAGTCTTTTTAGATGTTTCATTAATGGACTACATACGGANNN
NNNNNNNNNNNNNNNNNNNNNNNNNTTCACTCATTTTGCTCCGTATATAGACATCTAGTG
AAATATCTTTAAAGACTTATATTTAGGTACAGAGGGAGT