Contig Data
morexGenes
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Map Locations of contig_317820 (3561 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_317820

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_48123 1 357 bp None Available Available LOC_Os06g10350.1, FRAME:-3, EVALUE:4e-14, 13106.m01121 protein MYB family transcription factor, putative, expressed
MLOC_48121 1 709 bp None Available Available None
MLOC_48122 1 593 bp AK358937 Available Available None





CDS Structure of MLOC_48123






CDS Structure of MLOC_48121






CDS Structure of MLOC_48122






Contig Sequence (3561 bp)

>contig_317820 3561 assembly3_WGSMorex_rbca.fasta
TAATATAAGATGTTATTACATCCTATGTGTATATTGGATGTAATAACATAAGTGTGGCAA
TAATGTGTTTGCACCAGTTAAGGGAGAGCTTATTATGTACATTGTAAGAAACACGTCATG
TTTATTCCCCATCATTTAAGTGTGTGCCATTCTATATTTGTTCATGTTGCTTATAGTACA
TTTTCAATATTTTCAGGATATGATTATGATGATGATGCATACTGCTCCTCTGGAGTCTAC
GTCTCTTTGGATTCTTGGACACTTATAGCCAATGAGACTACATTTTCGGTTGTTAGCTGG
AGCTATCACTATGACTGGAAATTTATTTCCGCTCAAGTAAATTTATATGCTCACTGAAAA
CCAACGACAGTCAACACTTATCAGCAGTTTGCAATTTGTATTAGAATGTGCCTAAGCCAA
TGGTCAGACAATCTTGGTCATGATTTATGTAGATTGGATAGTTCCTTCAAACTGCGCTCT
TCAATCTTGAGTGGACAATTATATGTTTCCTTATAGAAAATTTACTATATGTTTCATAAA
TTGACTGATTATTTTGTCCCTGTCAGATTAAACTAGGTCTTGATTTGAAGGTACAATTGA
TTAAACTAGGTTTGTTTGTTGTACTAACGATGCTCTTTAGACACACATGTGGTCTTCCTC
ATTCCTCAGTCGTTATGAGTTGGGCATAGTTTCGCGACCCAGCCAATCCTGGTTCATCGC
AACATATGTTTTCTCCACACAAGTTTAAATAATGCAATCTCTTCTTAGGCTATCAAAATA
TGAGCTTGATGAAGGTAGACAGATGATGACGTCCCTTACTTTCTTGATTAATTAGGAAAA
TGACATTTTTTTCTTCCGTTGCAACGCACGGGCATATGTCCTAGTTATATTTAAGAACTG
AGGGAGTAACTGAGGTTGAATAGACCCCTAGCTTTTTCGTTGCCAATACGTAGGTATATC
ATTTTTTATATATAAAAAGATGGTGGTCTCCTCGACGACGCCACAACAAGGAAAACAACT
CCCAGTGGCTATGTCATGAGCACAAGGCACATCCATCAAACCACTGCCGGTAGGGGCCAT
TTTCTTGTGAATGCCTTTCACGAGGAGCCACCTTTTGGATTGTTGGTAGAGTTTGATCCG
GAGATGTTTGCTGTGGTGTCTTCTTTGTAATCATAAACAAAACATTGTTTGCCATTTGAC
ACGAGTCAACTTTGTAGAAAACCGACGCCACCACCAGAATAACCCTATATGCCGGCGGTT
TCGCACCTAAGAGCAAGTACAATAACATACAGTCAGTAGACTGTAAGAATTAAAATATTA
TATTTTTACTGAGTTGGATGAGAGAGAAGGAAAACGGGCTCTTCGTGAAGAGCTAGCTCT
AGCACGTGCTCGTAGGTGCTTTGTGAGAATGAAAGGTGAGTCATATATGATAAAAGTAAT
ACTCTTTTATAACTAACTATTGTACAAGCTAGCTATGAGATAGGTTATAAGACTGCGTAT
AGCCAGCCGTTAGCTATACTATTAACCATGCTCTAATATAGTGACGAATTTTTTTGTATT
GCAACAAAGTACACCGACATCCATCCAATTGTTAGGCATTTATTGTCGTCTACAAGCATC
CACTTATCGATGCAGAGGTCCGTAGATATCCTCCTTTTCGTTGAAAAAGTAGAGCCGCGT
TGAAGAATAATTATATTCTTATTTAGAAGTACAATACAATGCAAAATGTGGATGCTCGTG
TACACACATACACTTATACACCATCCATCTAATTAAACGGCTCGAGAGAGTGTGAGTATA
TATGATTAGAACTGGATCACAGGCCGTAGTTACTCATTAGTCAGTACTCAACACCAAGCC
AACGTACGTACATGGAGCTGTATCGTACCACATTTGTGGGGTACGATACAGCTCCCTGTT
CGTACGTACGTAGTGATAAACATGCACGTGCTGAAAACAAGTGTGTGAGCGTTAATCTGC
CATCTGCAGGGACCTAATCCAGTCCTCGTCGGACTCAAGAAACGACGCCAAGGCTCTAAC
GTCGTCCATCCAGTCGCCACCGCCCGACGATGCCGCCAAGCTGCTGCCGCTGCACTCATC
TCCGTCTCCACCCACGGCCCGCGTCTCTGTGACCCGCTGGAGCGGCGCCGCATCCCGGCT
GAAGAAGAGACCGCCCGTGCACCTCACGGGCTTGGGCGCCCACACTGCGGCCGACAACTT
GGGCGTCGCAGCCTTGGCTCTTGTTGTAGCAGCCCCGGGGTTGGAGGAGACGGAGCTGGC
GGAGGTGCATGGCGTGGCGACCATCCTGGTGGTAGATCGCTCCGGGACCGGCAGCGCCTT
CCGCCCGAGGGTGCTGTTCCAGTAGTTCTTGATTTCGTTGTCTGTTCGGCCGGGCAGCCT
GCCCGCAATGAGCGACCACCTGTTACCGAGGAGCCTGTGGAGCCTGACGATGAGCTCCTC
CTCGTCGTCAGAGATGTTGCCCCGCTTGATGCTGGGCCGGAGGTAGTTGAGCCACCGCAG
CCGGCAGCTCTTGCCGCACCGCCGCAGGCCTGCAAATTGTCTTGGCGCGCGTGAGTTCGT
CACTCGCTTACGTTCAGTTAGCTCTCCATTGTCTATGACAGAACGGTAAGTACGCCTACG
TACTGTCTACCAAGCTAGCTAGGGACTCAGGTGGATTAGTAGCAGAACGTACGTACCGGC
TTTCAGGGGGACTTCCTTCCACCTGCCTTCGCCATTCGCCTTGACGTAGGAGGCCAAGGT
TTCGTCCTCCTTGCTCGTCCATGCCCCTCTCTTCACCCCTTCCCTGGCGCTCCACGCCCT
CCTCCCCATTCTCTCCTTCTCTCTATCTCTTCTCCGGTGTGTGTTGTGTTGTGTTAGAGA
GCGAGAGAGTGAGGGTCCGTCATCTTTGGGCAGCAGGGTTGTTGCCGTATTTAGTCATTA
GCGCGTCTACGTGGACCCGTTTAGCATTGTACAATAGCGCGTCTACGTGGACCTGCTTTG
CACCTTCAATCCACAGTCATCGTGAGCGACACTTATCTCAGAGTTAGATGGACCAAAAGC
TAGGAAGGCTCCATTTGTCCAATGAACAGCGCGGCCATTTCTTCGCCGTCCAAGATCGCC
GGCAGGTGAGATGTACTATGTCGTATTTCTTTTGACAACTGAAAAGGATCGTTGCCCTTT
GAGTCCAAAGAAGCCAGAGCACGTAGCTTTTGCTCGACGGCTCACCTGTGTCAGCACGAG
GCACCCGGACCCCCCAAAACCGAGGGGGGGCATCCCAGATGTGTGTGAGCATGGAGGGAG
CATCCCACCCCGTTGTGGAATTATGTGTCATGTAACTATATTCAAACATTGATGGGAAAT
TCTATTTAGAAGCGTCGCATGATGGACATTCCATGCAGCGGCTTGCATCATTTCTTCTTA
TGCATACATGCATGCAATGATGTCATGAGATTCGTTTTAAATGATCGGAATTCAAAAACT
TTTATCTCTTAAACCGTTAATTCAATCGATGATTCGTTTTCGTCGTTGACTTTGTTTCGA
TGAAATCTTCAAAACTAGATC