Contig Data
morexGenes
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Map Locations of contig_316014 (2114 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_316014

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_48004 2 1970 bp None Available Available LOC_Os08g14330.2, FRAME:-3, EVALUE:2e-31, 13108.m01530 protein aldose 1-epimerase, putative, expressed
MLOC_48003 1 940 bp MLOC_48003.1 Not available Available None





CDS Structure of MLOC_48004






CDS Structure of MLOC_48003






Contig Sequence (2114 bp)

>contig_316014 2114 assembly3_WGSMorex_rbca.fasta
TCTATTGGAGTTGGTGTTTTACAACACGAATATACAACATCTGTTGGAGTTGGACGTTTT
TTGGTGTTGTAAAAAGCACTTTTTTGGTGTTGTAAATTATACAACACCTAGTTTACAACA
CCAAAATATACAACATCTATTGGAGATGCTCTTAGTCTTCTCGCACCAAACGGGAACCTT
TGGGGACTCCTTGGGAACCGGGAGCCGACCCCGGTCCCTTAACACAAAAGGGGAAAGCCT
CCACCTCCGTGCCCGTTGGCATGGCTCCTAGCACCGTTCGGCACGGCGTGCGCCATCCAC
ATGGAGGCGCAGGACCGCGCGACCTCACCGGGCCACCTATGACTAAACTGCCCCGTGGAG
CCTTCGAGGCAACCTCATGGGAGGGCCTTTGCGTGGCTCCCAACGCTGCTTGCCGATGCG
AGCCTCGCGAGGCGAAGGCCCTCACGAGGGCCTTGCTCGTGATAACCAACGGTGGGCCGT
GTTGGGCCGCCGACATGCATCGCGTCGTGGGCTGCAGGTAGACGGGCCTGGGTACCCCCG
GTACCACAGTCCCGACACTTTCTCTCGGAAATATCTGATAATCATGTTTTCACCTTATGT
TCTGGAGGCAAAGATGTCAATCTCACATGTGCCTTTGTTTGTTAACATAGAAGTATCATG
TCAATATAATTACTGAGATTGAAAATGACATATTATGTATAAAGAAATTGAATAAAATCT
TAACTGTGATTTTAGAATTACTGTAGTTTATGCTTTCTCTCTTACACGCTTAAAGCAACC
TTATGGTGGTTATTGGTGCTACAAGTTTCTTCACTAAGCACAGTGGAGTGGATTGCTCTC
GAGTGCATGAAACTACAATACATAGGTTCAACATTATCATTTGTCCTCCATTAGTTATTT
CCATGCTTTTCTTTGTTTTATACAGAATGCCTAATAAAAGACATGTACGCTATATTACAC
CAGTCACTGTACAGATGGCTTAGCTTATTATTTTTAGAAGGCATTCAAGCAGGCCACTAT
TCCAGCTATAAAACTCATTTTTTTCTTCTATTGACTATGTTGTATCTATATACAGAACAC
CACTCACTAAGTTCTTCCTGTGATCACGACACTATGTTATGAAGCATCTATTCACATTAG
ATTCACCGCTCTGTTATGAAGCATCTGTCAGATCAGTTACATGAAATTTTCTAACACTCT
ACCACAAACCAAAACTATTAAAGTTCACTTCATCAAGAATTAATGCCATACCACTGGCCA
TGATAATCTTCCCTTAAAAAGCAGTACCACATAGAGTAAAATAAATACATTCCATTCGTT
GAAGACCAACTATAATCCCTTCTTGGATCAAAATTTCCTTATCTTATTACCGATTGACCA
ATACCATACTATTTCATTGTGGATCTAAATTTTATGCTACATGCCTTTATGATTCCATCT
GAAAATTGGATGGGCGCGGCAACGCGTGCCTTCAATGATCTAGTTCAACATAAAAAGGTT
TTCCATTAAATCAAGCTTACCAGCATCTGGAAGTCCTTCTTTTGCCACGACGAATGTTCT
TCTCATCTCATGATCAATAATTGCAACTTTCGAGGGTGCAGCAAGATATACCTTATCAAC
CTTTATGATAAATACAATTACAGGTAGGAAGCATGAGATATCAAGTATTTATCTTGATAT
TTAGATATTTAACATGAAGTAATACACCTACTTCTGATTCAAATACAATAGCATCTCCTT
GCTCTGTGAAACGCTGCTTTCCCTTCATGTTGTCAAGGTAGTCCATTGTTTCCAGCCCTT
CTACACGTACTTCACTACAGGGTTTATAAGAAGTGAGAATACTTGCAGTGGCAGTCTCAA
ATACTATTATCGATGAGAAACAAAGGCAAAAGAATAAAGAATTCAGCACTTAACCAATTG
CAGTATCTCGATGGCAATATCATCTCATATACTTACTTTCTAATTAGCACAATCACTAGA
ATGACCACACAAGAATATATCAGTATTATGTTTTCTCCAATTTAGCATTAATATGGAAAA
GCTTGCACCGAACATAGGCCCTGTTTGGAACCACAATAGATTATATTATAATAATCTGGA
TTATGAAGATAGAT