Map Locations of contig_306818 (3726 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_306818

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_47482 1 2299 bp MLOC_47482.1 Available Available LOC_Os09g36030.1, FRAME:-3, EVALUE:5e-127, 13109.m03539 protein 4-hydroxy-2-oxovalerate aldolase, putative, expressed





CDS Structure of MLOC_47482






Contig Sequence (3726 bp)

>contig_306818 3726 assembly3_WGSMorex_rbca.fasta
CAACAATGTAAAAGTAAGCTTCTGCCTAAACCCAAGAGCTTGAGACAGCAACTATAAGGT
ACCTGTTTGAACTCTGCTTCTGGTCTGACATCAAGAATTACAAAGTTATTTTCATTTTGA
AGGCGGAGTGCTTCCTTCACATCCACACTACGTACCTGCAAAAACAAACAGGAGAAACAC
CTCTGATGTAAATGGTGGCTGCTAAGCATAGAATGCTCATCTTCAGTCAACAGTAAATTA
AGCCAATAAATATATGAATCAACAGGAATAGGTAGATAAGTCCTCATAAATGTCAAAACA
GGGCCTATTACACACATACTCCCTCCGTCCCATAATAAAAGAGCGCTTTTTTACACTAGT
GTAAAAAACGCTCTTATATTATAGGACGGAGGGAGTAATATATAATTGTTCTATGCATGC
ATATGCTACTCTAACCCTCTTCATAAGACTTAAACGTTAAGAAGCCCGCAGCAACCTTCA
TATACATTTAATACAAAAAATATTGAGCAGTCAGAATGATGGTTATTACCCGCTTCTCTA
ATAGGAGTTGCCGTTTGATCTTCCATTCTTCTTCAGCTGCAAAAAAGGGGGGGTAAACAT
TCCAAGATAGTATCATGCATAACAGAATAACAAACAGTTCCATATCAAGTAAAAGGAGCC
AAGCATATTCACAGTACCTGGAGATTTCGCAGTCTTAGTGGCAGCACATGTTATCCGCAG
TGAGCGCACACCATGCGTCCGGTAATGTTTTGCAGCTTCTAATGGGCGCCACGAATGACC
AGATGAGAAGTCTGAGCAGGAGGATATCCTTGACGAGCAAGGAAGGTTGGCTTTCACTAC
GGAGCTAGCTGTGATCATCGTGGTCATGAGATAAAGAAGAGCAAAAACTTGGGGGGAAGA
ATCAGAAGGGAGCTTAGCTAATCCTAAGGCTGCACCTGTTGCTGGAAGGAGATATTTTGG
GATGTGCAAGTGTCCAAAGGACCTAAATGGTTCTGGATGGGATGTGCCAGCATATCTGAA
CTAGTGGTTGAGGTTGAGCAAGTGTTGAGATTGACAATCTGGAGTCTGGCTATGTGGCTT
ACCCTGACCCCACAAAACAAACTCACCAACAATCTTTTATTGGAAAAACTTACCACTGCT
TTTCTCTTGCCATGAAGTAATTTCTGATGATTGGCTCATACAAATTTCTAGCTTTTCACA
AATAAAATGGAGCAGAAGGACACAGCAGCATTTCACTAAAATCCAACTCTTTATTAGGTA
CTCACCAATTACCACCTACGAATGGGAACAGTAAGGTGCCCAAACAGATTGCCTCCTAAA
AACCAAATCATCGACTAAACAAGAGTACACCAAAATCCAGAAAATGGAGGCCCTAAAAGT
TTCAGTTCAGAACACAGACAAACGAAACCACCACCAGTTCCCCAGTGCTCATTCACTCCA
GTATCCATCTTCCTTCTCATCCTCCTCCTCGCCCTCTGCTTCACCAATCTCCATTGACGC
CTCCTTGAACCGCTTGACATCCTCCAATGCCGCCTTCCGGAACAACCCAATGTCCACTGC
ACCTGCAACCATATGGTATCCCCTATGCTTGAGCTGCTCAGGTGGGTCATTGGGCATCGC
AAACCCACCCAAGTAAGCCGCATTGGTCCCCGGAGCAGCGTCCTTCTTCTTCCTGGCCTC
CAACACCTTCCGCTCAGCCTCCCTCAGCGCCGCTCGCACCTTCCTGTTCCCGGGATCCCA
CAGGTACCCCATGCTCGCCGACAGGTCGAGCGGGCCCATCTGGACGACGTCGACCCCTTC
GACGGCGGCGATGGCGTCGATCTCCGCAACGCCGGCCGCGGTCTCGACCTGGCAGATGAT
GAGGGTGTCGTCCTCGCAGCGGGAGAGGTAGGAGTCGTCCAGGCCGTAGGCGGATGCGCG
GACGATTGGGTAGGCAGCGCCACGGACGCCGCGGGGCGGGTAGCGGCAGTGGGATACAGC
CTCCGCGGCAGCGGCCGGAGACTCTACGGCGGGGAGCATGAGGCCCGCGGGGCCGAGGTC
GAGCGCCTTCTTCGCCCAGACGGGGCAGGCCTCCGGGAGGCGGAGGACGGCAGGGGTGCG
GGCGGCGTCGAGGGCGCGGAGGCAGGCGAGGGCCTCCGTGATGCCGCCCGGCCCGTGCTC
CATGTCGACGACCACGTAGTCGTAGCCGGCGAGCGCGGCGATCTCAGCGAGCGTGGGGGA
GAAGGAGAGGAGGAAGAGGCCGTAGAGGGTGTCGCCCGCCGCGAGGCGGGACTTGAGGGA
CGGGGCCGGGGCGAGGAAGTCGGAGGCCGCGGAGGCGGAGGCGGAGGCGGAGATGGCACC
GGCGGCGCGGGAGCGCCTGCGGGGGAGGACGGAGAGGCGGAGTGGGGTTCTGGGCTTGGG
TTTCGGCGCGGGGAGGAGGTGGGAGACGGACGTGGCGGCGGTGACAGAGGCGGCCATGTT
GGCCGATCGGCGGTGAGCGGCGGCTTTGGTGGTGGTTTGGGGGATCTGCGACTGACGGGG
CCGGCAGCGGCGGCCGGGGAGTGTTGGGGGAGTGCGACTGCGGTGACCGAGCGTCGTGTC
CCTTCTCACGTGCCGCGTGGATCTGGCTCGGCTAGATCCGTGGAGCAGAGCTGGCCAAAC
GGGCCGGCCCGGCGCTCTGTAATCGTGCCTGGCACGGCCCGGCCATCCATGGTTAATAGC
CGGGCGTGTCGTGGTAGCCCACGTGCTGCAGCCTGCAGCCCAAGCACTGATAGATGCTAA
TCGGTCCTTCGTTTTTTGTCAGTTGGGATTTTTTTTTGCACAGGCATGTAGGCCCTTTGT
TTTTTGTCTGTTGGGATTTTTTTTTGCATATTTTACTTACGGGGTTGTATTAAACATATA
TAGTACATATATAAAGAATATCAACAAGTTAAACGGGTTGTGATGTGTCGATCCGCGTGC
TCAGCCTATCGACCCATGGTGCGTCACATGTCGGGCCTGGTCTGTTTAGCCCGTGTCGTG
CCTGGCACTTGGCGGGTCGTGCTGACGTGTTCATGGATTGGCCTATTCAGCCAGCTTTGC
CATGGAGCACGCACCTATGGGCGCCTGTCGTCAGATTTTACGGTCCTTGCATCCGCTGTG
CGATCTATCATCCAAGCAAATCTTCAACAACTCCCTTTTCCCAATAAAAAAAAATCCACA
TTACTACGTGAATGAAATGACTGGTTTACATAAGGACATGGTCAATGGACTGCCTCAAAC
CTGTTGTACCATTGTCCACTTAGGCTCATATGCCATGTTGGGCAAAAGGTGGTCGTCGTG
CAGGTCATGGTGTGACCTGCAGAGGAAGTTGCTGTTTCATGAGACAAACCGAAGAGAAAG
GAAGGAGATAGAGGAGAAGAGAGGGAAGGGAAGTGAGAGATGGACACAACATTTATTTGG
TGAGCACACAACATATTGGCTCCACAAAAGGATGGCCTCGTGCCTTGGCGTTGAATGAGA
CAAAATTAACGAGTAGCCTCATCTTCTTGAATCTAGGTGGATGTGTTGGGACACCGGCTA
GGTGTTGCCCCCATTGTACATGTCCTAAAGGCAACTCCAACATCGCCGGAGGGTTTGGTC
CATATGTGTCCATTTGGATTGAAACAAAAAAAAAACACTAGTCCAATGTTGTTACGCCCA
AGATGCGACCCTATCATTAATTTGGCACGAAGGCCTCGTTAGGGTTAGAAGCGCATCTCG
TCGTGT