Contig Data
morexGenes
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Map Locations of contig_305003 (1189 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_305003

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_47380 1 820 bp MLOC_47380.1 Available Available LOC_Os03g04310.2, FRAME:+3, EVALUE:3e-43, 13103.m00439 protein BHLH transcription factor, putative, expressed





CDS Structure of MLOC_47380






Contig Sequence (1189 bp)

>contig_305003 1189 assembly3_WGSMorex_rbca.fasta
CCGCCACCGGCGTCTTCGAGGTGCGCCGCAAGTTCCTGCGCCACGACGGGAGCGGCAAGC
ACCTGGCGAACCTTCGGGCGCACGACGTTCGCCGCCACGGCCGCTCCCTCGGCGCCTGCA
AGGTGGAGCCCGGACTGGCGGCGGGGGCTGACGGCGGCGCGTTCGGCCAGGGCCAGATGT
CGGCGATGCCGGTGTCGAGGAAGAAGCGGGTGGAGGGCATGCCGTCCAAGAACCTGATGG
CCGAGTGCCGCCGCCGGAAACGCCTCAACGACTGCCTCTCCATGCTCCGCTCTGTCGTGC
CCAAGATCAGCAAGGTGAATGAACACCACCAAATCATCCATCTTGGCAGAATGAGGGGTG
GTGAAATCTTGGGACTGGGAGTAAATCTGAATGTCGTTCTTGATTTTGGGCGTGTGTAGA
TGGACATGACGTCATTCCTGGGGGACACCATCGACTACATGAAGGAGCTGCTGGAGAGGA
TCCGGCGGCTGTAGGAGGAGATGGACGGACCGGAGGTGGTGGCGGCGCCGCCGCTGCTCA
ACGTGTTCCGGGAGCTCAACCCCAACGAGATGCTCGTCAGGAACGCCCCCAAGGTCAGTA
CAGGGATAGGATATCTTCTTCCGAGAGCTTGTGTCGCCAATGGAGTAGAGAGCTGCGCCA
TTGCTGCCGCTGCGGCTTGGAAAAAATAGTGGTGACCGAGGGATGTGTGGTTGCAGTTCG
AGGTGGAGCGCAAGGAGGAGGAGGGCGACACCCGAGTGGAGATCTACTGCGCGGCCAAGC
CGGGGCTACTGTTGTCGACGGTGAGCACCCTGGACACGCTCGGCCTCGACATCCAGAAGT
GCGTCGTCAGCTGCTTCAACGACTTCGCCATGCACGCATCCTGCTCCGAGGTAACCAAGA
ACTCCTTCATCCATGGATTCATCATCCATGAGCAAACATGGATAGATTCATCTTCTTCTT
GAGCTACCATCATCAGTTCAGCTGGTCAGGTCACCAATTCCATCTCATTGATTGGAGTTT
TGTGGGTGCAGATGTAGAGGGAGATGATGAGCACGGACGCCATCAAGCAGGAGTTGTTCA
AGAATGCCTGCTACGGAGGCGGCTTCTTGTAGAGAGACGAGCAAGAAGTAGCACCATGAC
CACCACCACCATGATTCCATGACCAGCAGGAGAAGCAGGAAGGATAATA