morexGenes - Barley RNA-seq Database

Contig contig_300847

Source Contig contig_300847

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_300847 (1597 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
		No map location

Predicted Genes from contig_300847

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_47113	1	1058 bp	MLOC_47113.1	Available	Available	None
MLOC_47114	1	303 bp	MLOC_47114.1	Available	Available	None

CDS Structure of MLOC_47113

CDS Structure of MLOC_47114

Contig Sequence (1597 bp)

>contig_300847 1597 assembly3_WGSMorex_rbca.fasta
CGTGGTTCGAGAAGATGCAGGCCGACATGCTCAAGTTCGACGACGAGTGATCTATGGCGG
CGAGCGCCATCCTTTTTTGTATGCCGGCAAATGTGAGGGCATGACCACGACCGCAATGGC
TTTGGGTCGAACTCCCGCCCCTTTTTGTTTGTTGGCATGTGTGCCGGCCGCTGGCAAGTG
CGCCAGCATGAACCGTGTGGTGTTTTTTTTTGAAGCTGGCATTGTATGCCGGCTGCTGGC
ATGGTGTCGGCATGAACTTTGGGCGACAACATGGCCGCTGTCTTGATCTACGGCCGCGGG
CCTTTTCAAATGTGTGCACGGACATGAAATGGGTCGCGGGCGTTGGGCGCACTGCGGACC
CAAATGTTAAACAGGGCTGACGCCGAGCGGGCGGGCGACCCAAACGGACAAAAAGCAAAC
AAAAGCGCCTTCCGTTTGGGTCGGCGCGTTGGAGTTGCTCTGAACCAACCACTCGTGTGT
TTGTTTCAGATTCAAAGTTACACACATGCATGCTTACTGGACCAAAGACCTAGGCATAGC
ATGGCAGTACAAGGCCCCGTGATACAGTGTTGTAAAAGTAAAACCATTAGAGAGTTGAAA
AAAAGTAGTATTCCTTTACAGTGTGCAAGAAAAGGTAATTTTATGTGATATTAGTCTTTA
AACGTGTAACAAAGAAAAACTCGACTGGTGGGGGAAAGACCGCCCCCACGGCTTTGCACT
AAGAAGAATCTCTTCCTGGCCCGGTCGAGAAAAGGCCCTGAAGGCCGGCTGCCCAGAAGC
GCCACAGGGGACCCAGGACATGTGGGCCCTTAAACGTGTAATCAGTTGATAATTTTGCAA
CAAAAAGTGTAAGTTTAGAAATTTACTCTTATGTCTGATGTGTCCTGGTTGTGTAGTGTG
TTGTAAATTTTGTTTGTCTTCAGCGATGTCGAGCATATAATCACATGGTTATAATCCAAG
TAATAAGCAGTTTGTATGTTTGGTAAAAATCACTGTGTTGCATGGAATCAGGAGTATTAG
GTTGTTTCCATATAACCTTATCATAATTGTTATACTGAAGATGCTTAAAAAGAAAGGACT
CACAGATGGAAAATTTTAGTCTGCCATTATGCACATACAGGATATCCAAAGAAAACAGCT
ATCTAACGAATCTAAGCTGATTTCATACCAATTTGCATAATTGTCTGTCATCTGCTTATC
GTTCCTACCATCTAGATGAATTGAATAGTGTGATGTGATGTTTTCCTTTTTATCCCAAGC
ATTGCTATGTTCCTGGCTTTCAGATTTCTTTTCTTATTGCACGTTGTTCTGTGATCATAT
AAATGTTTGTTAATATATATCGTATTTGAATCCAATAAATTGCAGGTTGAAGATCTATCT
AAGGAGGCTCAGGTTGAAAGAGAGCTCATGCTTATAAAACTCAATGTTGAACCAGATCAA
CGTGCTGATGTAAGATATGCTGTTGACTTGTATCTGCAATCACTGAATTAGTATATTGGT
AATGGTACTTCCATACGCAGTTGCAACAATACTCTTAATGTGCTGTTTCTTCTCATGGTT
GATAGGTCATGTTTGTAGCTACTGTTTTCAGAGCGAA