Map Locations of contig_300480 (5772 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_300480

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_47088 5 2946 bp AK376185 Available Available None





CDS Structure of MLOC_47088






Contig Sequence (5772 bp)

>contig_300480 5772 assembly3_WGSMorex_rbca.fasta
GTCATGTCAGTTCTGATGGTGTTGGAATGGTGTTTGGTCCTCTAATATCATTCTTAGCGT
TGATAATTAACATGTATTTTGTAGGTCTTCTGAATATGCTGCTCAAAACATACAAGCCAC
TTCAAAAAAGCTGCTTTTTTTAATCAATCTTATTATCTGAGAGAGATGTCTCGAAGGTTA
CTCCAGGGCTGTACAACGCAGTTCATCCTAATTGCAGTATTTATTTCTGCTTCAGTTGCT
TGCTGTAGAAGGCAATGAATTAGTAATGCCGTGTACTTTACTGTTGCATATAGCACATTT
TCAGATGCTAAAGATATCATGCATGTAGATATGCATGTGAGCTCTGAAAGGGATGAAAAC
CTTTAATACATTCACTTATTCATACATAGCAGGTTGATGATGTGCCCTTTTGCTTCATGC
TCCTAAATGCAGAACCAACTTAGTTATTTATATTGACGATACTTCTTATTGTATCAAATT
ATTTATATTGTATCAATTTGATGTTCCTTGACAACTGACTTTTTTTTCTTCCATATTGAC
AGATGGGGACACTTCAGTTAGAAGACATTGGTGATTACCATTTACCTGTAGAAGTTTCTC
ATGCTTCGGATGATGACTCACCAGTATCCCCATGCATAGGAAGTGCGCACCAGGTAGAAA
TCCCCAATCTGGCCACAGATGATGAACGACGTCACCTAATGGCCAGCACTCTCTACAGTT
GCAAGTTACATGGGTATGATTATCCTTGTGTTTCTGTACCAGCTGTATGGGGAAGCCATC
CACCAAGTCAAGTTAACAAGGAAGATATTACAAGTGAAGGTAACTCGACATATCTGGATC
CTCATGCTGCGCTACCAGTAGATCAAATTGACTCTGCAAATAATCAAGTTTGTGATGAAA
CACTGGTTCAGTGTTTCACCCGAGAAAGACGCGACCTCTTCACTGACAAGACAATGGTGC
ATCAAAGAGAAACAGAAAAAACTTCTTCACTGCATGGCTTATCCACCTCGGTTTGGACTG
GTCTAGAGGAAGAATGCTTTCTTCTTGGGCTGCACATTTTTGGTAAAAATCTCAGCCTGC
TGAGCAAGTTTATAGGCATTAAGACTGTTGGGGAGATGCTCTCCTACTACTATGGGAGGT
TCTATAATGGACCTGCATATAAAAGATGGTCGCACCTTAGAAAGACAAGAACTACTAGAT
GCATTCTCGGGAAAAGCATTTTTACTGGTCGGCGTCAACAGGAGATTATATCTCGTTTGA
AAGATAAAATGTCCAGCGAGGCTCATGGTTCGTTAGTTGAGGTATGCATTTTGATACAAT
ACGGATTTCAATCTCTTTCACACGGTTATATGAGCTGAATTACTTTTGCATATTTCAGGT
TTTAAGGTCTTTGGGATCTGGCCTAACATCTTTAGAGGAATGTGTCTTTACTCTGAAATC
CATCATTGGACCAGAAACTTTTGTTGAGGTCATTGGGATTGGTAAAGGGAAGCATGATTT
GACTGGATTTGTTCAGGACATATCCAAAACAAATAAACGTCTATCTCTTTCTGCCAACAT
GCCTTCCATGCTTGCTAAAGAAGACATAGCCAACGCCTTAACAGGTGATTTCAGCAGAAG
TAAGGCGAAGGTAAATAATCTATTTTGGGAAGCTGTTTGGCCACGTTTGCTTGCAAGAGG
GTGGCACTCAGAGCAGCCAAAAGATGTCCGCACGACCAAGAATTACCTTGTGTATCTACT
GCCTGCTATCAAAAATTTCTCAAGAAGGAAGCTCACTAAAGGCACTCACTATTTTGATTC
TATCACTGACGTCCTTAAAAAAGTGGCAGCAGACCCCACTCTTCTTGAGCTAGAGACCGA
TGGAATATATAACGAGGCAACTGTTGATATGAATGGCCGGGCAACAGGCCAAGATGGTCC
TTTGGATGGTGATCTGGAGCTTCCAATGTTCACTATAATTGATACTAGCTTGGTCCAAGG
GGAAGGGCCCTTCAAAGTGAGGGCTCTGAGAAGCTTACCCGCTGATGCAAATATTAGCTT
TGGACCTACAGATCATTCAGATAATGTGTTGAGTGACAGTTCTTCTCAGGAGCAACATAG
TGATGGTAACTTGTCAGATGACCAGGAATGTCATGGACAAGTGACAGCTCCTGTTAGTGA
CATTGAAATGGAATCAGTTTACAGTACAACCAAAGAATCGCTGGTGGATTTGCTGGAAGG
CATGGTGACTGCACCACAATATGTCTTTCCAGTTAATGGCCATTCTTCCGATGATCAGCA
ATCAAGCATTTCTAGTGGTAATGGTGACAAAGCAGACTTGACATGCTGCTCTGTCATTGG
AAGGAAAACTGGGAGACTGGTGTATTTATCTCCAAAGCGCAGAAGATTTGCTAGGTACAG
TAATGACAAGATCAGCCAACACAGCTTTTCTTTACCAGATGATAATGATTTGGAGAAAAA
GATACTCAAGCCTTTATCCACTACATCAAAGCCAACTGTTATTGATCTTGGTTGTAGTTT
CCAAACCAGAACACTGGCAAACTGTTCCACGAAGGGGAAGCCATGTGAGCAGATAACAGA
GGTTGCGAAGACTACTACCAATGGCAGATCTCTTGAGAAGCGGAATGTGGTGAATACAGA
TGAGGACAAGTCATCAGAAGGAAAGTTTGATGCAGTAGCCAGGACTAGCATGGGAAGGAC
TTTGCCAGACAATCATTATTGCTTGCGGAAAAATGAAGATGTAACTGTGGTGAATACAAA
TGAGGACATGTCACCTTCCATTTTGAATAATGAGATCCCAGTTCCTGATGTTTTGGAGGC
CGCAGGGAAACATGATCTAACTGTTGAGATGATCTCTCGGAGGCAGGGAACCAGAAATCG
GCCTCCCACCATAAGAGCTCTTGAAGCAGTTGCTCTTGGTCTCCTCGGAGGCACAAAGCG
CAAGGGTGATGCAAGAAGCTTGACGACAAGAAGACCTCGGCGGGCTCGCAAGACCGAAGA
CTGAATGTGGGCATCTCCACTAGTAGTAGAGAGAAACCCATATAATTGGAGGACAGAGCA
CAAGATGAGCAGATTGTCTTGCGTGGCTTGGATATGTGTAAAGTGTGAAAAGGATATAGC
AGGATTTTGACGCTGGGGTGGTACATTTCACAATCAGCATGAGCCATCCGAAGCATCCGT
CGGTTTACACATCCTGCTATATAGCATGCTTCGGATATAGCAGGAGGAGCTCACTGTTCC
CTCATCATGTTTACAATGCAGGCATTGGTGATTGGTGATACCTTGTTCTTCCTTTCTTTC
TAGAAACTCGGATGCATGAGAAAGAATTTTACAATTCATATAGTTATTATTTCTATTTAG
TTTATAGAAGGGTTTCATATCTAGCATGCTGTGCAAACCTAAGTGGTAATAGAGAAGAAA
GATAAGCACCATGCTGACCGGCTCATTGTTGTGCTTAATGATACCTTTGGTTGTTTTTGT
AAGTTTGGATGTGTAGAAGGTTTGGGTGTTTAGCTAATGTCGTTGTTTCCCGCATATGTT
TTGCCTTTGCATCCGAGAGTTAGTTAGACCAGTACTAGTTGATAAAAATGTTTGACTTTT
GGTCAACAAATACATGTGCACAGCCTGCTAGTAATGCCATACTACTTCCTCTGTTCCTAA
ATACTCCCTCCGTTTCTAAATATAAGATCTTTTAGAGATTTTACTATGGACTACATACGG
ATCAAAATGAATGAATGTACACTCTAGAATAGGTCTATATACATCCGTATGTAGTCCATA
TTGCAACCTTTAGAAAGTCTTATATTTAGGAACGGAGGGATAAGTCTTTTTAGAAGTTTC
ACTAGGGGACTACATACGGATGTATATAGACATATGTTAGAGTATAGATTCACTTATTTT
GTCCCGTATGTAGTCTCCTAGAAAAATCTCTAAAAAGACTTATATTGAGAAACGGAGGGA
GTATATTTACTAAGCCGAGATTTGGATTTGTCACATGACTATCAACGAAATGACAAGAAA
AGGGCAAGTCATGCCAACAAAAACTGGGGTACCGTATAGTAGGAGTATATTTTATTGATA
CATAGATAGAGGGAGTCAACAAACTGGAGCACTCTATTTTGGAGGGACAGAGATTTTGTT
TTCCCCTGGTCAGTACTCAGTAGGGAGCAGATCGTGGTCTTGCCATTCTGCACAAAATTG
AAGTAGACGATTTTATGAAGTTAGTTACTGTTTTGAAAAGTTCGGCTTCACAGTTGGAGT
CGTCAGTTTGTTTAGAGGAAAAGGGTTCAAAGCCGGAAAGTGCCCTTCTACACCCGAGCT
CAAATGAACTCAGATGAAAATTAAATTTAAAAAATATTTGTAGAATATACAAAAAAATCT
TTTTTTTCTTACAGCAAACTTTAGTAAATGTTATAAGAGCTCACAAAATTTCAGTATAAA
ATCACATTTTTGAAAGTCATGGAAAAAATAGTGCTTCAAAATGCTTTCAAAAGTAGCATT
TTCAGAGTTTTGATTTTGTCTTTTTGCCACGACTTCCACGAATGTGGTTTCATGATAAAA
CTTTGCGAGCTCTTAAAACATTTCTCAACGTTTTCCATAAAATATATATTTTTTAACATT
TAAAAAAAATCGAATTTACTGTTCACCTTGAGCTCGGGTGCAAAAACGTCACGTCATCAA
AAGCCTCGACTCTCTTGCATCCATCAATAAAACCAAGTGTCTTACAAACTAATTATAAAA
AAAAGTGGCTTACAAACATTATTATAAGCCTGTAGAGGGAACAACTGACTACTGCATGAG
TAGGATCAAGTAGTTTTTTAGGAAGATCCATCATGTTGGCGTTCATTGATTTGGGAGAAT
AGCGTGATACAAGGAAGATGGCCGCAATTTGATCTTTAGAAGATATGAACTTGATTCGAA
GTAGTCTCTGCGCTAGATATTCCAAAAAAATGGTAATCAACTTTGATGTGTTCTGGACGT
GCATGAAAAGCCGAAGGAAAGGTATGTAACACAAATGTTGTCACACTACAGAATTGGAGG
CTCGTGTTGGGAGATTCCCAACTCGTGAAGCAAAGACTATACCAAATGAATTCTATTGTC
GCATTGGCTACAACTTAATATTCGACTTCAGTGCTACCGGAGAGACACTATAGCCTGTTT
CCAAGTACTCCACGCGATCAAGTTAGGAGCAAAATCCACAACATATCCCTCCCCAGGATC
GCCTATCATCAGAACTACCTGCCTAGTTAGCATAAGAAAAGGCAGAAATTACTCCAAAGA
AGCATGTCGAAGGTGTAAGCCATAGGAAACAATGAGGCAAACGTAACGCAAAATACGTTT
GGCAACTCACTAGTGAGAGTCACGAGGTGAATGGAGGTACTGGTAGACCCGATTGTTGAC
CACAATCAATAGTTCGGCCTAGTGATTGTGAGATACTGCAAGCCACCAACAATACTTTAG
AAAATAAAATGTGCGTCATCATCAGATAGAAGGTCGCCACTAACAACGGAAATCTTATTA
GTAGCAACCCTGGGCGTGGAAGTTGCTTTGCACTTGTGAGGGATCACTTGAAGGGATGTC
TAGAGGAGGGGGCGGGGTGAATAGACTACTAGGCAAATTAAAACCTAGCCTTTTCCCAAT
TTTAATTGTTGGTAGATTTTAGCATTTAGAACAAGTCATATACAACCTACACATGCAAGT
CTACGAGAATAGGAGTGGAAAGTAAAGACATGCACATGTAAAGTAGGGCGTAGAGTTTAG
GAAGATCAAACG