Contig Data
morexGenes
Links



Map Locations of contig_300035 (3128 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_300035

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_47055 4 1801 bp MLOC_47055.2 Available Available LOC_Os02g51640.1, FRAME:+1, EVALUE:1e-118, 13102.m05876 protein expressed protein





CDS Structure of MLOC_47055






Contig Sequence (3128 bp)

>contig_300035 3128 assembly3_WGSMorex_rbca.fasta
CCCCACGCTCCTCCCGCTCCGGAGGGCGATCTCGGGAGGAGCGGCGGGCGTCCCGCGGCG
AGGTTTGCGCCCCCAAACCCTACCCCTCCTCCCCGTCTCGCCACCCCATCCGAAGGTTCT
GGCCCGGCAGCCACTGCGCGGGAGGCTGGGGGGCGAGGCCAGGCACCGCCCCGCCATGTT
TCCTCCCAGATTCGGCTCCCCCCCCTTTCGGCGCGGAGCTGGAATCCCCGTTGATTCATC
CTCACGATAGACTCGCCGTTTCCAAGTTTCTGTAGCGACTCTACTTCCTCTAAAGTGGTA
GTACCAAGACGACGGAATGGAACCCTATTTCCCCGCTAAGTCGTTGTCAACTCTGCCGAA
TTACCCCGCAACAACGCGCATACGTCCTGTGTATTCCTTCTGGGGGCCGAGAGCGGGAGG
ATTCCGTCTCAGAAACCCTCGATCTCATCCAATTTTGCATCGATTGGCACTTAGCTGGCT
CGATTTACCCCGAATGTTCTGTTAGCTTCCTAGCCTCCTAGCACATGGCATTGCTTTGCT
TCCGGTAGTCGATGGGACAACCGTTTTTACAATGAACAAACCTTAGCCCTTTGTTCTGGC
TATAAACCATGCTTATGTGCATTTACTGCCTTCTTTCCCAACACAGTGTGAATACATCGC
TCACATTGTATTTTGTTTCCGAAATGATCAATGCAGTTGTATTATACCGTTGTCCGCGAC
GATTCTGCTGTTAATTTTGGCAAGTTGGTGACTACCTGGAAGCTGCAATGACTGAAAACA
CCCAGGGCAGTGGCCGACGAGCCTTTGGAGACCTGACGAATGTCCTTGGCAAGCGGCCAG
CCTCATGCGATCTGGAGAAGAGTGCAGGTGGAGTCAAGATTAGTCGGGTTGAAAAGGTCG
TTGACCCTAGGAAAGAGCCTCATGAAAAGGCTAAGGCCAATGTTGGGGCATCAGGAAACC
TTATTGAAGTTTTGGTCGATGGTATTGGCAAAGAGGACTTTGCAAGGACTTCAATTTTCC
GTGGAGCCAAGGTTCAGCACATGGCTGCTCAGGCAGCTGGGCTACTATCCAAGGATGATG
ATGATGTCAGGAATCGTTCTCTATCGTTGGATTCTTCTGGCCTCAACGACAAGGCGGAGT
CTTCCTTGGAATCAGAGGGTGGCTGTGCAGGGGAAGATGATGATGACACTGATAGTGAGT
TGCTGCCATTTGCCAGTGAGGCTAGTAAGATTGTAATTAATGATAAGAATAATGAGGGTG
AATGTCTGACTCAAGAGGAGATGGTTGTATCACCAGGAAATCAGAATCCAGAGTCTTCGT
TTGACGCTGCAGCTCGTGATGACATGACATGTACAAATGTCCAGCATCCTCCAATGGGGG
TTGGCGACTTGGAAAAATCATGCGCTACAAAGTCTTGCACTTGCTCTTTCTGTCTTAAGG
GTATGATTACATGAATTTCTTGCTTCCACATGCATTGTATGTGTCATTATGATGCCATGT
GAACATACACCTTATCTCTTTATTCCTGTTTGAACAGCTGCTTTTATGTGGACTGATCTC
CATTATCAGGATGCAAGAAGTCGGCTTGGTGGTAATTCTCGGCATATTCAACTCTCTCTC
TCTCAGCAGTACATGTAGTGTGGTTTCTTTGTTTGTTCACTATTGATCATGTTACTAATA
TTGATTCCATCTCTGTCAAACCTTTCTTTAGCATTGAAGAAGAGCATAAAGTTTGCTAGA
TCGCTAGAGGCAAAGAGGCAAGGAAATGAATTCAGTGCAGACAGATACTCGCAAAGAGCC
GCACAGATGGGATTCGAACTATCTCAACAACAGAGATCACTCTTTCTTCATACTGAAAAT
GCCCTCGTTCGTGAATCTGCCCAGCTTGTAAGTTGTTTTACACCCACAATATTCCATCTT
AGTCAAAACTATGTCGATGGTATCTTGGCATCAATTTGTATGGTGTCACTGCGGTTAGTA
GCAAAAAGTTGTGGTTGTCAACAGTTTACTCTCGGTGCAAATGTCTGTTTGCTTGCACTG
GTAAATTTTGGGGGACCATTGGTTTGTTAGTTTGTGGAGGATGAGTGATGAATTTAGCCT
TGCTGTGGCGCTCAGTAGTTTGGCCTTCAATTTATCGTTACATTGTTTGGGCCAACACAA
AAGGCAAATACTTCTATCTTCACAAAATATTTTATGACCAGCTAAAAACCATAGTTATTC
TAAAGATGCTCTTGTACTCGATATTTCTTAGTGCCTATCTAGGCATGTTAAGTAGGTAGT
TGGTGTCATTTTTTTTGCCACATATTAGTTTATTTCCTGTAAACTATTTTTTTCTCACAT
ATTAGTTGCCATGTAACAACAGATTTAGACATGCATCATTGTCGACGATGGAGGTATTTT
TTCTGTGTTCCCCACAGCTATGTGAGCATGATGATGGTGAGGTCTATTTATTTTGCTTTC
TTTAGCCCTCTCCCTCATGCCCGTCTACCTTGGTCTTGTGGGAACCTCCATGGTTTTGAG
TTTGATCGCATTCTTCTTACCGGCAAAAAAGATAAGCATCAAACTTATTTCATGGTCATC
GTCCAGCTGACACATCAAGTGGCACTCAACACACCAAAAAGCGAACTACTTTGTCACTCA
TCTTAGAGCAGAACCACTTGGTCGGTGCCCATGTCTTGAAGCTAGGGATCATAGGTTGTT
GATCCATTTTCATATTTAACAGATAGCCCTCTCGTTTGCCATGTTTCTTGATCACCCCGA
GAACTCATGCCACCTCAAATCGTCGATCCTTCATGACATTTCTGCTCTTTTTTGAGACAT
GCTGCTGTGCTACGCTTGCTTGTTGTCGGTGTTTAACTCATGCCACCCCAGACTTGGTGT
ATGAAAGTAAAAATGTACCAAATTGTAAGCATATCCCCGCGAGGAACTCTGTATTGAAGC
TTTGCATGTTGTATGGCATCAATTCTGTTTTCGTACCAACAGCTTGCAGTCTGCTGCTGA
ATATGCACAGTTTTTCTCTAAGAGCATCTCCAACAGCCTTTGTATGTTTGGCTAGGATTG
CTAAAAACTGGAAATATAGCAACTTGGCCCAAAAATGTTGCTCCAACAGCCTTTGTATAA
GTGCCCCC