morexGenes - Barley RNA-seq Database

Contig contig_294754

Source Contig contig_294754

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

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Map Locations of contig_294754 (1660 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
No map location		No map location

Predicted Genes from contig_294754

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_46722	1	314 bp	MLOC_46722.1	Available	Available	None
MLOC_46721	4	1031 bp	MLOC_46721.4	Available	Available	None

CDS Structure of MLOC_46722

CDS Structure of MLOC_46721

Contig Sequence (1660 bp)

>contig_294754 1660 assembly3_WGSMorex_rbca.fasta
GGAGAGCAGCAGCGCGCGGACGAGGCCGGTGCGGGCGGCAAGAGCGGGGGGAACTCGTTG
TATCTGGGCTGCGACGTGCAGCACCTGGCGAGGTGGGTGGAGCACGCGTTGCCCTTCTCC
CTGCTCCTGCTCGGCGTCTTCAACCACCAGCACCTGTAAGGTACGCGAATCCGCGTGGAA
CACCTACCTCTTTCTTCTCTATGTAGCGTGAGGGTATCCCTCATCAGGCTATACCAGTGA
ATTTGTGATGCGAGTTTGATTTGATCCATTTTGTTGTGCTCTGCCCAAATACTGCGGAGA
GTTGTTGGTCAGAAGATGATGGCGAGTTCCTCATTCCAATAGAGTTTATATTGTGTAGGT
TTCTTTGTGATGATTTGGATTTCTGTAGTCATGTTGAAGTCCAATGATATCTTGCGCAAG
GAGACCGCTCTCAAGGTTTGTGCTTCTTACCTTGTGTGTCAGCGTGCTTGTTCTGCTTCT
AGAGGTTCATTAATTAGTTGTTCGGGCAAGCAGACTGCTCTCAAGGGCTTGTGGTTCTTA
TCTGGTGTATCAACGTTATTGCTATTGTTATAGCAGGCTACAGGGTTGGGGGAGCGACGT
TGCCGGTGTCATGTGGGGCTTCGGTTTCGGTCAATGCCAAGGACTGCGATGCCTCACCAT
GGCTACAGGTTGAAACGTCGTGCTGCGGCTTCGTCTTCCTTCCTGTTTGGTCCGGAGGAA
ACTTTGGCTCCCGGGTCTTCCGGATCAAGCGATGGTGGCCTGCAACGTCGCATTCCCGGG
ATGGGGCTTCGTCTTTGAGCTTGCCTTGCTAGGGGACTGGTGGCTCTGAAAATCATCTCA
CTCAACTGTTGCTCTGTAGTGTATGATGATGTTTCTCTTGTTATTTTCAATCTTACACTC
TCAGTCATGAGTCGAGCTTAGTGGATTGTGATTTTCAAGACAGCCTGCTTGGTGTCATAT
TTACATAGCTTGCTTGGTGAAATTCTGTTTATAGTGTCTCATTATTTAAGCCACCGATCA
TAGTTTAATTTGTTAAACAATAAGCAATAAAATCCTCCACTCTCATTATTTAATTCTGTT
TGGCAATGGAGCTAGCTTCTCATACATCTATCTTTTCATTTAGCTAGCTAGCTAACTTGG
TCCATTTCAATTAAACATCTATCTTTTCATCTATCTTCTCATGCATCTAATTCTGTTTGG
CAGTAAATGTTGGTTAAGACGAGGAGCGAGTAGAGGAAGCAGCGTGGATGGCCGGTGCGG
CCAGACCTCTAGGCCACGCCGCATGCGGCGGAGCCTGTGGGCGTCCGAATCAATTCGAAG
GCGAGGCTGTTGTCCGGATCCGGAGCACGGGCGGCGAATGAAGCCACCACGTTCGTGCAC
TCTAGGAGTGAATGGCAAGATGAGGCTATGGCAAAGGATCTCAAAGGCCATGGCGCTAGC
TGCTTATGGGGACAACCACACCGTGTATTGTCTCGATCTAATTCACGTAACCACATATAT
CATTCATGGATTGGAGAGACAGTGCGAGGCCCAAGATAATCCACTTGATATTACAGGTAT
AATGATGCAATTCACACAAATGACAAGCTTATCAAGATTGCCAGCGAGGTACTCAAATGA
TTTGAATTTCAAGCTCTTCATTTTTCTTGGTTGCCAGTCT