morexGenes - Barley RNA-seq Database

Contig contig_293459

Source Contig contig_293459

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

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Map Locations of contig_293459 (1545 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
No map location		No map location

Predicted Genes from contig_293459

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_46633	1	425 bp	None	Available	Available	None
MLOC_46632	4	346 bp	None	Not available	Available	None

CDS Structure of MLOC_46633

CDS Structure of MLOC_46632

Contig Sequence (1545 bp)

>contig_293459 1545 assembly3_WGSMorex_rbca.fasta
CCCCCCCCCCCACACACACACTCGTATTTCAGATAAGAAGAACAGTTACAGTACTGATTT
TATCATGAAGCAAGGAGATGTTTTCTGCCTCTCTTTTTTTGTCATTCCCGCCTCACGTTT
CATGAAGCAAGGAGATGTTTTCTGCCTCTCTTTTTTGTATATAGAAAAAAGATACCATTT
TGTTATGCTGTTGGTCTTTGTTATAACATTCTGGAAATGTTTTGGTTCATGGGATAACCA
AGTCGGTATCATCATACTTATACGAGTGCTTGGCAATTTTCATGTTTGCAGATATATCAT
TCTAGCGACCAGTACATTAAAAGGACAGTTCTTCTACAAATACAGGTCGCATTCCTTAAC
TGCCTGATTGTCTCATATTGATTTAACTTGTTTTCATGCTGCATACTCGCTCCATTCCTA
AATATTTGTCTTTTTAGAGATTCAACTATGAACTAGATACAAAACAAAATGAATGAGTTT
ACATTCTAAATTATGTCTATATACATCCGTATGCAATTCATAGTGAAATCTCTAAAAAGA
TAAATATTTAGAAACGGAGAGAGTAGAATGATCCGTGGCTTTTAAGGCATCACAATTGTT
CTGCTCGAGCAAATGAATTTCTCACATGCGCATGCTAACGCAATACCTCTTTGATTGTCT
ACCAAGCTACATAAATGCTATCTCCGAAAGATTTAATGTTCAGTTGTTAACTACGAATAT
GATCTCTACCGTTGTACACATGAATATTCTTCTAAAATAAAAAATTAATATGAAAGTCCA
TCTGAGCTTATACACAATATTGGAAGTAGTAGTGTGAGGGAAGCCAAGCAAGTATCCGTC
GAGAAAAAATGGTTACAAAACTTTTGTACTCCTTAATTCAATCAAAAGAATAAAGCAATT
ATATTATTACTTACTTCAGAGAAGGATGTGCTTAGTGATGTATCAAATGCATAACGTGAG
TTGGATGTCGAAGATTTCTGTTTACCAGGTGTTGAAAATAATAAAATGCTGCATATACTT
GTCTTACTACAATTTGTGAATGAGTACACTTTGTCATCCTTTGTCATATAAGATCATCTT
CCGTGTCATCAAAAGAAAAGGTTCTTGAGCAAGCGGACATGAACACTGATGAATTGGTTT
TCCTAAAATACATTAGGAATGTATTGAATTATTAATAGGTAACTTCCCGTCAATTTTTCA
AGATAAATATTCTATAATTTGATGATAGTTGATGTGGTTGAAATGGTATATAAGTTCTAT
TACTGCATTATGACATGCGTAATTAAAAAGTGTATATTGGTAAGGACATGCATTGCACTT
ACATGTTTACTAGCATACAATTCATCAGTGTTGCACATTGATGGCAGGAATACTACTAGA
GGATCATAACAAGGGGAAAGGATAAGGGAGAAGGGGAATCTACAAAGAAAGGACAAGAAG
ATGGCCCTGAAAAATGAGTAGTCGGAGAACAAGAAGCTTATTGTTGACTTCCTACAGAAA
TATCATAACACCTGAGAAAATTGTTGGTGAGAACATCACACATGT