morexGenes - Barley RNA-seq Database

Contig contig_292500

Source Contig contig_292500

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

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Map Locations of contig_292500 (2012 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
	No map location	No map location

Predicted Genes from contig_292500

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_46576	2	504 bp	AK364505	Available	Available	None

CDS Structure of MLOC_46576

Contig Sequence (2012 bp)

>contig_292500 2012 assembly3_WGSMorex_rbca.fasta
AATGTAAAAAATCATCCAGTATTATGGAAATGCCATAGCTAATTAGTATTGTCGGACTTT
TTCTTTTCATTTATGAACTAAATGAAGCGAAGGGTGGAAAGATTTAAACTAACCCCATAT
ACTGTGAGAACCTTTCTGCACCGACAATTTCTATAGCCTCATTATCTTCCATTGAAGCCA
TGAAGAGCATGCCTACAATCAGTTCTGGGTTTATCATGAAACGGATCTCTTCCTGTACCA
TAGAAGAGATATAGAATCCATAAGAGAACCATAAAAAACTTGCATCATTGTAAATTATCT
TAACTAATCAACTGGCAAAACATCAAGATGTGCTATCCAGCAGAATTATGACATATCATG
AAGGTGCTTCAATTTGCATCAGACCCCATGAAATCAAAACTGGTCTTAAGATAGTGACTG
TGACACAACAATAAGTTTCCATGTAGCACAGAAGATGATGGATAAGTGACGTACAATTCA
TACAAAATGAATGTAGGAATATATTCTAAAACTAGTACTAAGCAAATAACGCCGCATAAT
TAAGGCAATCCCAAATGGGCACATTTCTTAATAAATCAAACATTGAGGAGGTAATCTACC
AATCAGAGAAAAGAGACCTGCACACAACCCCTGGAAAGTGCACCTCCTCCCAGATATTTA
TTAGCAAAGTCAACCTCGAGGGCTTCTTCTTCCTCATCTTCTATCAAACCCGAGGAAATT
ACCTACTAATGAAAAGAAAACAAACAATCAGCAGACTTCATAATAGTTGTGAAGAACATG
AGGCATTTTGATAACGTTATGATAAAAGATAACCCTAGTTGTTCCTAATATGTATTCCAG
TGTCACAGAGTTATCTATTCCTACTACCTTATTTCCATTATCGTGCAATACCAGGATACA
GATAATTTATCATGCCCCATAGCCTCATCCAAATATTGATACATTAATAACTCAACATTG
CAGCATATAATTCTCCCAGGATGAAGACACATGATGAGGAACAAACAGATGATAACATTA
AAAAAGACCAGCACATCTACTTTTCCAGTGTGTCCAATCTCCAAAGTATGTCTGCCAGGT
GATGCTAATTTGAAAACAAATGACCGTTGTAAATAGACCTTCATAGAATGACAGAAGATT
AGAAAACTCAATTAAATAGTCGTGGCAAATCTCCACAGTACTCCTAAGACATCATTACAG
GAAATTACTCCCATCCAATTGAATACACATTCACCCTTATGGTTTAGCTTTAATATATTT
TTGACACTTAACCACAGGCACGGTACTATGAGCAAGTTGAACTTCATGTAACATACACCA
GTTGCCTGTTTCAAGTTTCCAAATCCCAAAATGCCCCCACATGTCTAAGATAGTAAAATG
TCGTTTCTGAGGATGCTTAGGGCAATGGTTATAGACCAAAATATGACTGGAAACGTGAAA
TATGAAGACAAGTGGCTATTCTATGTTGTTACAAGACCAGATTGTTGTCTTGATATTGCT
TGAGCAGCTAAATCTCAGCCACCTGGTCGTACAAAGTCTAGGATGGTTGTTAATAGATAT
GTACTAGCAATTAATCAACTTCCCGCAAGCTATGCCCCGTAGAGAGGCATATGGTCTGAA
ACAACGCTAGCTTTGATTTAACTAACGCACGTGAATCCAACTAACTTGCGCACGATATAA
TTTCAGAGGAGCCCTGCAGAAGGACTAAAATGGAGCATATGAAGCCACTTACCCGGAATG
GGCAGAGGGGCACGCTAGATTTCATCCAGGCATCACTGTCAGGGCAGGTAATGCCGCCGG
AGACGGAGCCGCGTGAAAGAACCTTGCGCTCAAACGACACAAAACCGGCAGGCATGGAGG
CAGTCACCCTCTCGAAATAGTGAGCAATGCACCTCACTTTGTGCTCCTGGCTCTGCCTCG
CATTGTTAGTCAGTGCCCTGCCAGACCATAGAAGCATAGGAGATCAAGTAAGAACAGCTA
GTCAATTTGAAACTGCAAGGTTTAATTAAACC