| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
No map location |
Predicted Genes from contig_288072
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_46285 |
1 |
955 bp |
MLOC_46285.1 |
Available |
Available |
LOC_Os05g47700.1, FRAME:+3, EVALUE:6e-36, 13105.m05055 protein LTPL152 - Protease inhibitor/seed storage/LTP family protein precursor, expressed |
CDS Structure of MLOC_46285
Contig Sequence (2961 bp)
>contig_288072 2961 assembly3_WGSMorex_rbca.fasta
TGCCATGGCAGCGAGTTCATCTGATTCTGATTGAGCTTATGCATCGCTGTTGGCTGGCTC
CTAAAGTCCTAAGTCCTTATTTCTGCTATTCTGGACCTTGCTTATTGGCTGTTTAATTTG
TTTGTCTGAAATCTCGATGTATGAACTATTGAACTCTGAACAATGCTATATGCCTATATC
TAGACCATGCTTTGCTATGTGAACAATGGTTTAGCCTTGGTTTTAGCTGCTGAAATCTGT
CATTTGTGTTGCTATATGCTGAAATCTGAACAATGTTTTGTGACACGCTATTTTGCAAAA
TAGCGCGCTATTAGCACGCTATTTCGTTCATAGCGTTTTTTTGAAGGCTGCGCTATTTCA
AATAGCGTGCTATTTTTTTCTTTGGTTGTACCTTTGAAAAGCCCTGAACTTTCTAAACCA
CGTTTTAACTCTTACGTTTAACTCTATATTACCAGAAGATGTGTACGTTTCTTTGGCTCT
GTTAATCGACTGCACTCCTAGTAATGTAACTCTATATTACCAGAAGATGTGTACCGTTTC
GCTGTGTTTTAACAAGCTTAACAAATCTTCAGCTCAGCTGAAGAAATCCCCACCCAATAA
CCTGCCTTTCCCTCTGCTGTGCGACACTTGCGGTGACGCAGAGAGCTAGTGCGCACGGCA
TTGTTATGCTAGTTGAGTTGCTTTCAGCGCGACTAAAAGTGCCCACTATATATTATCCTC
CTTTTGTTCTGCATCGAGTGGTGCAGTGCGTGGACCATTTCTGCTCATCATCTTGTCTTC
CATAAGCGCAATGTGCTTCTGACAAGATGGCACATATATGAATTCAGCCAATCTGCGCTG
CACACTTGTTCCGCACTAGCGACGCTTACACTTGTGCTCAGCTCACTGTCATCACCATCC
AAGCAACTCTGCTAGTCTCTTGATCGAGAGCCTATAAATACCACCCATCTTGCCACAAAG
CGCTCACACCCATCTGAAGCCATACTTGCAGAGGCCACTAGCTCACTACGTACGAGTCGA
TCAATCTGTTGTTTCAGCGAGACACCATGAAGTACTTGGCCCAGCTGGTGGTGGCGCTCC
TGGCCTTCTCGGCAGTGGTGCTGATGGTGGCGCCGGCGGGCGCGGAGGCGGCGACCTGCA
ACGCGCTGCAGCTGACCCCGTGCGCGGGGGCCATCATGGGGAACGCGGCGCCCACGGCGT
CGTGCTGCAGCAAGATGAGGGAGCAGCAGCCTTGCATGTGCCAGTACGCGCGCGACCCCA
ACCTCAAGCAGTACGTCGACTCCCCTAACGGCAAGAAGGTCATGGCCGCCTGCAAGGTGC
CCGTGCCCTCCTGCTAGATGGACGCATATATGATCGATCCATACGGGAGAGCGCAGCGCG
CACGCGGGCCTCTCTGTCCTCTCGCTGCATGTTTCATGTGTGTTCATGTGTCAGTGTTTC
CCAACACAATCTAGCTACCCTGACGATGTATGTGGAGTTGTGGACCGATGTGTATCTAAA
TTTCTGAATATACGCAATAATGGTGATGTATCCAGCTATATGTAATTTATATGTTTCTTC
CTGTGGCGTGCACATTTTCATGGCGCTCTTTGTGGTAGTCATCAATTGTTATAAACTAGA
AACAATCTCATGAAAAGACAACATGGTTTTGGGAATCTTGCAGCAGAATTGTCATTTGTC
TTGTCTTTCTTCAGCAATCGACATTAACAAGTTGACCAGTAAAACTGGCCACAAAAAAAA
AAGAATTAACAAGTTTTTTTTTACAGCAAGAAAATATTTTTTTAACGTGACAGCAAGAAA
AGAATTAACAAGCTAGCTCATATTTAAAGACAATGATATCCCCTATTCATCAGAGTTTAA
ATCCCAGGCTTGACAATTATGCTCGTATTTTTCTGAATTTATTTCAAAGCATCCGACGAG
GTGCATTCCGTGGAAAACAATGTTCCCATCTACTATGCAGGGCCGTCTTCAGGAATTTAG
GACCCGGGACGAAATATTAAATGGGGTCTTTTTTTCAAATTCATACAACTAAAGAAGTAT
TCAAAGAATATGAGTCATATTACATCGGCCAAATAATACCTCGCTATCCAAGGAACGCCT
CATGCCAAAGCATACATAAATTTGCTTGATTACACAATATATGTAGAACTGAAACTCAAA
GCTTAACAACGGAACCAAATACATTAAACAAGACAAAAATAAATAAATAATAATAACAGA
CAGAAAAGTATACGTACCGAATCAATAGTTTGCTTCATCCTTTAATCCTGTATGTGTAGA
CACTCTTGTTGTTGGAGGTCGCTAATGAAAATATGTTTTCGTCTTATTTTTCTGTAGGAT
GAAATAAAATTGATATAAAAATGCATCAATTTAGGTTTCATCCATACATGTAAAGCTTTC
TTTTTCAATTAAAAATTACTCTGTAGTTAATTGTTCAAAGAAATCAGCTCACCATACAAC
ATGTTAGTTAAACTTCAAATGCATCTTTTATTGTTTTATTGCTTCTCCCAGTACAAGATA
TCAGTAAATTACTCACTGATTAGTAGCCAAGGCGACGAGCAACACCGGCTTTGGAGAGGC
AGCAAGTCCTTCGTGTAGCAGCGAAGGCAAGGCCAGCCCCCGGCGGCTGGCGGAGGACGG
GAATCATAGCCATGCCTGGTACGCTAGTGCAAGCACAGAGCAACTAGTAGGAGGTGCTAC
ACTAGGGCAGAGCAGCCGCAGCCGGCGATTTGCAGTAGACCAACACTCGTGGATTCATTG
CAGATCGCAAGAGAGGCGGCGCGTGTGCGCGGGTGAGGGACTCGGGAGGGCTACGAGTCT
ATGACGGTACTATGAAAACGTCTGTGGCAATTTTGCCAATCTAAAGTTAATGTGCCGGCT
CAGTCTTTCATAAGTACTCATAAAGCTATGGTGTAAGTTCATAAAGATGAATGTATTTAT
CTTTTAGAAAAACTTATATAT
