Contig Data
morexGenes
Links



Map Locations of contig_286411 (1033 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_286411

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_46170 4 717 bp MLOC_46170.1 Available Available LOC_Os01g48700.1, FRAME:+2, EVALUE:6e-38, 13101.m05054 protein transcription factor Dp, putative, expressed





CDS Structure of MLOC_46170






Contig Sequence (1033 bp)

>contig_286411 1033 assembly3_WGSMorex_rbca.fasta
AAGATATATGCTTGGGAACTGATTTATTTTCTCCCCGTTTGAGTCATTAACTACCTCAAC
AAGCTACTGTCTATTACAGGTTGCGGATGAAATTTATTCAGAGCTGAAATCCATGGCACA
TATTGGTCAAGGGGTTTGTTCCTATTATTTATATAATATGGATTTCTCTGATCCCTTTCT
GCATTTATTTATCTATTTTGGAATTAAGAAGCATCGCTCCCAATTTCATTTGGCATGGAA
TTAGTACAAAGAGTGTCAGCCGCCAAATGTCATGGGTCCAGACAGCTTATTACAAACATG
CATACGTTGTAGAACCTCTAACCAGCACCGCCACCTTACTGTCTTTGCAACTACGACGGC
AGAACACACCAACCTAACAGAAAACTGGACAAGTAAGTTACATCAAACATCAAACATAGA
AGATCGGGACCAAACCTAAATGTCGACATCACTCCGAGAACTTTCGAGTGCATTTCTCAT
CAAACTGTAAAAAACAGAATCATATGTGCAAAACTTACGTGCTAACAAAAAATAAATTTA
TTTTTGTAGTTTGATGAGAAGAATATTAGGCAGAGAGTGTATGATGCTTTCAACGTTCTC
ATTGCACTTCGTGTTATTGCAAAAGAAAAAAAGGAGATACGGTGGATGGGCCTTTCAAAT
TACAGATATGAAAAGCTAAAGAAGTTGGAGGTCGGTATTCGTGCTTGGTTTTCAGGCTAG
ATGGACAGTAATCCATTCCTATATGACTATTATTTGATTGCTACCATCTTCTTTTTAAAA
GGAAGTTCGCAAAGAACTCGTCAACAAGATTAGGCACAAGAAGGCACTCCTCCAGGAAAT
CGAAAAACAGGTAAGTTGTTTACACTATGCAGCAGTTTTCTTTGGTTTTGTTACCTCCTA
CTATTATATATACCGCTGTATTTGATATCTCCTGATGATTCTTTCTTGTTCATTTAAAGT
TTGATGATCTCCAGAACATCAAGTTACGTAACGAAACACTGCAAAGGTCAGCAGAGAACG
TCAATGGCATCCG