Contig Data
morexGenes
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Map Locations of contig_285894 (1112 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_285894

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_46134 1 1112 bp MLOC_46134.1 Available Available LOC_Os02g26510.1, FRAME:+1, EVALUE:2e-28, 13102.m02870 protein retrotransposon protein, putative, unclassified





CDS Structure of MLOC_46134






Contig Sequence (1112 bp)

>contig_285894 1112 assembly3_WGSMorex_rbca.fasta
AGAGCAAAACAGATTAGTTATGGCATATGGTCATTAACATGCATATGTGATGTAAGCCTA
AATGTTAACCAGCAACCATATAATACTGCCAAGCTATATAAGCTACCAGTTTATATCCAT
ATGAACCAAGTCTCGTGCCCACTCAAAAACACAATGTTGCATCTCCAAGTGAAACTCGTA
TGAACATAAATGCAGTAACATGATAGAAATCTGGTGATAGAAATCTGGAGATAGCACTAA
TCGATCTACTCGATGTCATCTGTAGTTCGTAGGTAAATAAAAATGTGCATGTCAACTTGA
AGTCCTAGATAGTTTGTACAAATACTCATATCACCAGACTGCCCCTTTAAACCTGTATGG
ATGAGCGTTCTATTAATATATATTTTTCAGGATGCTATGTTAAAAATATAATACTGCCTT
GTACAGATTAAATCTATTATATCATTAATTTGGAATTCTTACATTATACAAAATCTCATA
CAGTAAACTTATTTGGAGCAAATGGATGCAGCCAAAGAACAAAAAAGAAAGAGAGATAGA
GATCGGTATGCACGGATGACAAATGAAGAAAGGCAGGAGTCAAAGGAAAAAATAAAAAGG
AAAAATAAAGAGCGGAATGAACGGATGACCGAGGAAGAAAGGCAGGACAAACTGAAAAAA
AGACGCGAAGCCTATCATCAAAAGAAATATTCAGGAAAGACACCAGAACAAAAGGCGACA
CAACGCGCACAAGAACTGAAAAAATACGAAAACATGCAACCAGAACGGAAGAAAGCAAGA
ATAGAACAAATTGAAGTTCGTCGTCAATTGAAACGCAACACACCATCAAATGATTCAATT
GCAATGGAGAACCCTGAATATGTCGCAACCGAAGAGGAAGTTAGAAGCTCCAAATTAACT
ACAAAACACAGGAATCGTGTCGCAGGAGGAAAAAGGCAAACATTGATACATGAACGTAAC
GAAGAATTCACAAGAAGACGGAAGCAAACTGTCGCCGAATCATCAAAAGAAGATAAATCC
ATGACGGAAACCTGCGATGAAAACAATCAACCATTAGAGAAGCCACAAGTCATGACTTAC
GGTAAAAATCTCGATTTTATACTCGCATTCGA