Contig Data
morexGenes
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Map Locations of contig_283829 (1539 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_283829

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_45977 1 204 bp AK355680 Not available Available None
MLOC_45978 1 538 bp MLOC_45978.1 Available Available LOC_Os01g34480.3, FRAME:-3, EVALUE:7e-56, 13101.m03471 protein NAD dependent epimerase/dehydratase family protein, putative, expressed





CDS Structure of MLOC_45977






CDS Structure of MLOC_45978






Contig Sequence (1539 bp)

>contig_283829 1539 assembly3_WGSMorex_rbca.fasta
CATTAGTTTTGCCTGCCGAGACAACGCCTTTTTGCCGCTTACCATTTTCCCTCTTCTTGT
CATTGCCACTAGCAGGGGCAAGGACATTCAGAGATTTCTGAAAACTGTCCTCTCTGAACT
TGCCATTTTCATCAACGACCACGTATAAGCCATGAACTCCAGCAGGAAATACATAGTGCT
GGAGAGGTGTAGGTCGATAGTCGGTGTATACTATATGACAAGGTTGCTTATGTACCCGAG
AAACAAAATCATACTACTGTCATTATGTAGAACACATATATGCTGAAAATATAGATGGAT
GGTTGACCATGTAGTGCATTGTAGCAAACAGATATTTATGTGCATCAGCAAAATGATGTT
TATGTGTGTGTCCCTTAGATTTGCTAAGAAGAGAAATTTCTTATGAACTATCAAATTCAA
GGTAAGAACAGAAACAAGGGCAATGCAGACAAACCTTATCTACCCAATCAACAAACTCCT
TTGATTTACATTAACAAAATGGCACTGGTATGCATGTCCCTTTAATTAACTGAGCAAAGA
ACTTTCCTATTCTGAAACAGATCACTTGACAGTTACTTTTCAGTTACATTAACAGAATGG
CACAAATACAATGATCACCAGTTAAAATAAGACACAAATAAAGATGGAATAAGATCACTT
GACAGTTACTTTCCTATTTTGAAACTTCTCGTTATGGATTATTGGATTGTGTATCATTGG
ACTCAACCTACATTCTTGTGTGAAAACACAAAAAAAGGTCTTCAATAACAATGGTATCAC
CCTCTTATCCTAAGAAATTTTTATTTCAGTAGAGGTGCATTACTATGCACAACGCATTTG
CCGAATTGGTATGTAAGTTTTCATGTACACAGAACAAGGGCATTTGAGTGCGGGTGGAGT
GATAGACATAAAGAGCAATCAAAGCCAGATATATTTGTTAATGTGACTTGCCGCTCCATA
TGTGAGAAAACAACAAGAGCTCTTTGAGCACAGAAAGGCGTCTTACCTAATTCTTTTCAC
AGACCTCTACACTTGAAAACCATGTCTCGTCAACCACCACATCAGGAGTTCTTGGCTTCC
CATTGTAGGCAACACAAGCCATGGATGAGGTTACAATCACTCTCTTAATTGAGGCCTTCT
TGCAGGATCCATTGACTGCTGGGTCAAGTAACTCAGCCTGAAAGACATACATAAATACAG
TTAGTCCAATATGTGGCCCATCTCCAACAAGGTTGCAAAGTATCTCCTTACTGATGAACA
TTGTGTGGTCATGATATATATATATATGTACTGACCTTAGGGTCCTTGACGTTGTGATAA
AAGGGAGAAGCCGTGTGGAAGACACAGTCGCAGCCGGCGATGGCAGGATCAAAAGTGCCT
TCTTCCAACAAGCTTGCTTTGAACAAGTGCAGCCTCTCCTTGGCTCCATCCAGGGCTTAG
GCCCCAACCTAGAAACAGTATTACGGGAAGTCAGTTGTGTAGTTTTAAATTCACAAGTCA
GAAAGGCTGCCCCTGACTCTTGTGGACATAGATTTATTG