Contig Data
morexGenes
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Map Locations of contig_282907 (2724 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_282907

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_45901 1 643 bp MLOC_45901.1 Available Available LOC_Os02g13130.3, FRAME:-3, EVALUE:4e-37, 13102.m01456 protein KH domain-containing protein, putative, expressed





CDS Structure of MLOC_45901






Contig Sequence (2724 bp)

>contig_282907 2724 assembly3_WGSMorex_rbca.fasta
GCCGGTATATATACATGTACAGGTGGTGGNNNNTATGCAGGAAACCCCTTATATATTGGG
ATNNNNNNNNNNNNNNNNATGACTTATATTATAACTCTAACAACGTGGACCAGTGGACGT
GTGTGACGGTTCTCCTTTTTGATTTATTTTTTTGGTGATAGGTGGGTGGAGGCGTTTTCT
CTCCACGGGTTATTTTAGGGTCAATCTTTCTAGCGTGGATGCCAGTACCTGCGGGAGTTT
TGGGGTCGATTTTTTCTGTAAACCGGAGGTGGAAGTGGGAGGCACGGTGAAAGAAAATTG
ACGGCATGGGGTGATGGATAGGAGGAGGTGATCCAACCATCACCACGTTCGATTCTGCTA
TAATAGTAGAGATCACCTGTATAGAGGTTTGTACCGACTATCTCCAAAGATGTACAGAAA
TAGCAAACGCAAATTTGAGAGGACAAGATGAGGTATATGAAATCCAATCATATAATACAA
ATACAAACTAGTTCCTTCTGTTCCGATATAGAAAGACGAGGCATGTTCCTGGATGTATGT
ATTATATTCTAATGGTATACTCCAATGGTACACATGGGACTTCTATACCAAAACAGAGGG
AGTAGTTCATAATTTTATCTTTCATCCATCAGCATCAAGTATATTAACATTAGGTAGTAA
CAAATCTGCCTCCAGGATTGATGTGTGCAGGCCTCAGAACTAGTTACTTACACTAATTTG
GTCTTATGTCAAGATAATGATCAACAGACAATATGGCCTGGGATATATGGATAACACCAC
AAGCACCGGTATAATATGTAGTGAAGATGTTGTGATAGGGTATATAAACCTCCCATTGGA
AGTATGGATTTGCCAGTATTTAACTGTGATTGCTCAAAAATTTCTAGTACCTTCATCAGA
GAAACTACACAGAGCATAGCAGCTAAACAAAGAGACCGCGCAAATTACAAATATAATTTC
AGATTGGTTATGCGTCTCTAAACATCTTAGAAGCAAGCACACAATTGTATAAAGTATACA
ATCATCTCAAAGCCATACTGCTGCCTTGTTTTACAAGACAACCCGTTGAGATAACGTTTT
GGACATGTACATTTGACAAGAATATAGGGTATATCATAAATAAAGAGAAGAGTTCCAAAA
GCAAACAATGGAAAAGGAAGGTCAAGTAGAGAAATATAAACCGAGACAAAAAATACAGTA
ACATATAAAAAAATGATAATTAAACCCACATGATTTTAACAACACTGAGAAATAACAAAT
AGCTGCAGCAGTTAGGAGGTGGCGTGAAAACTGAAAAGAGAAAGAAAGCTGACCTCACTG
GTAACCTCACTCAAGCTACTTTGCTATTTCAATTTGCTCTGCACTACCATCAATATACAG
TGTTCTTTCAGTTGAAATATCACCAGGAGGCAAATGGAAAAGAATGACCTACAGAAGGAT
TTTTTAGGACAAATCCAATAGTACTATTACTATTGTTATTACCGATGGTAATGATGAAGA
TGATACGAAATATAATACTAACTAACAAGGAGAAAAGGGAGAATAATAAAATAGATAGTT
ATGAAGATGAAAGGAGCATGAGTTCTACATGAAGATGAAAGGAGCATGAGTTCTACTTCT
AGTTGAGCAAAATTAGAACTTGGATGTTAATTTACTTGGTAAATCATAAGAAAAATGAAA
AAAAAAATGCAACAACAAAACACATTACACAGCGCTAAAGTTATTAAGGAAATTCAATGG
TAAGTTATGTCAGGTTCAGCCAGCAAATTTATGTTAGACTTTGCAATAAGAATTTTGTAT
ACAAGCTCCAGATTTGGCTTGCATTGATTTTTTAGTCTCGCCAAAAAAATAGTCGGACAT
GGAATTAATAGGCAAGGTTTTTCACCATCAAAGAAAGTGAAGTCCGTGAAATAATATCAG
CTGGGAAGCTTACAAGAAACCCCCATTGCTATATTGGGGTGTCGTAAGATTTTCAAAGTC
CGACAAACAAACCCAATTCTAGAAAGCAGTCAGTTTACCTTGTTGTTAGCAATTTGCATC
TGGAATTGTTCAACACTAGGTTGAGGTGCATTGTACTTCCAATTAGGGATAGTGCCAAAT
GAGCCGGCATCAGCCTGCAGAAGGTCAGATGAAAAGTATGGTTGAATAAATGGATATACA
ACTAAATCTAAAGTCGTGACCATAAGAAAGATAGCATAGTACCTCTGCAAGAACATCACT
TATCAGCTGCTCAGCTTTGCTGATGTGGTCAGGAGTGCCCGAAAGATCAACCAATCTTGT
CTGTGACCCGGGTTGAAAATCCATGTCCCTTGTTGCTTGGATCTTTCCCCTGACTGGAGT
TGGATATGCTTTATAGTATCTCCAGCTTTTCCAATGATAACACCAAGCGACTACGTAGAC
GAGCTCCTTCACCCCAAGCGGCTATGTAGGCATGTTCTTGAATCTTGACTGCCTGCGCCG
CAGCACACACGGCACACGCAATTTAGTCGCCAGATTCCGCGGCGCGAGATGAGATGAGAG
GGATGAGAAGGGTGGGACGCTAGCCGGACCTGCGGGAAGCGGTGGTCGACGTAGAAGCCC
AGCGAGATGAGGGCGAGGAAGCGCTTGAGTGTCGACCTTCTCGCCGTCGAAGCGGGAGTC
GAGGAGCGCCGGGATGGCGACGGCGTCCAGGTCGTCGTAGAGATACGCGTCCGCCCCACC
GCCCCACCGCCCGCATCCCTGAAC