morexGenes - Barley RNA-seq Database

Contig contig_282706

Source Contig contig_282706

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_282706 (1516 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
		No map location

Predicted Genes from contig_282706

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_45881	1	426 bp	MLOC_45881.1	Available	Available	LOC_Os02g58300.1, FRAME:-3, EVALUE:2e-14, 13102.m06753 protein expressed protein

CDS Structure of MLOC_45881

Contig Sequence (1516 bp)

>contig_282706 1516 assembly3_WGSMorex_rbca.fasta
CCGAACGATTCGGCCGGCGCGCTGGCTGGAAGCGTTTCCCTTTCCCTCAAATCATTTAAT
GTTTCCTTAAAAGTTTGCAGGAGCTGCTCATCAAAACAACCCTTCTTCCTCAAATTTTGA
TGTCGTCGGCTTGCCCTCGGAAGACACGGAAGCCATGGGAATGGATGCCTACGTCTCCTT
CCCACCCTAGGCATCGACGCAGCAACTAAGAGCAAGTACAATAAGGTGACATAATCAAGC
TATAAGAATTAGAATATTATATCCTTGCTTAGTTGAAGGAGAGTGAGAAAAAACGGGCTC
TTGGTGAGTAGTCAGCTTCAGCACGAGACACAGGAAGGTGGACCAACTACTATTATAGTA
GTTTACATCTAAAACTTATTATTGTATACTAGTAAAAATGCCCGTGCGTTGCAACGGGGT
AAAATTTTTATTTTATTTAAATTATTATTTTGATTTTGATCTATTTTTCATTTTGACTTG
TCATATTGATGGCGTGCATTTACGATTACACTCACGCAGCATCGGAGTGGGCCGTTCGAT
ACTTTTAATCTTTGATGAGAAATACTACAAAGGAGTAAAGGAGACGTTGAGTGGATAGTC
ATTATAACGAAGATTTTTGTGCAGATGTTGAATTATCCACACGTGCACATTATTAACATG
CGTTTGTACAAACACTGAAATTATGCATCCGACAACTTAGTTAGTTCCTTATATTGATTC
ACGAGACAGCTCCTTGATACCCATAATATTAAAGACGTATATAAGTTGTGAGAATTGCAT
GTAAGCAAGGACTAATAGATGAATCAAGCCTTATGGGATTGCGGGTTAGTTTGGATTAAA
TATAGGGGGTTTTGTGAGCGGTACAAAGGCAACATATCTGACTTCTCTATAGTGCTTGGA
TCGTTCAGATCTACGGGTTCAAAAGGTGCCACACTGCTCCAAAGTTACACAGAGAAACAA
TATCTAAAGCACCAAGAGATGAATTCTGATAATAAAGAAGTGGTACAAACTGCATCTAGT
AACTGAAGTTTAAAGCCCACCTACAGGCGAGGCGACAACAGAGTTCCCAGTAGTTTGAAA
TGCAAATACCTTATATGAGGCGACAACAGAGTTCCCAGGCGGCCACAAGCACATAAAGAA
ACTGCTAGAGTCAGGCGGCCACAAGCACATGAAGAAAGACGAACGTCAGGTAGATTTCAA
GTGAAAGAAGAAAACAATGACTTATCACCCGCTTACAGGCGACAACATACTGTCCCAAGC
AGGCATTGAGTTACGCTTTCATCTCGGCGAGTGCGAGCTGGAAGGCGTCCGCCTCGACCT
TCTCCTTGGCATCACCCTTGGCAGAATTCTTCATTGCCATGCCGAGCTCCTTGGCATGCT
TCACCTTCCTGCTCTTGACCAGCCCTTAGATCAGATCCTTGACAGCCTGGAACGGCGGCG
CCCACTTGTTGGAGTGCAGGGACAAACGCGTTGTTTTCAACCAGCGCCTCGATCAGGATG
ATGTAGGTCTCGAAGT