Contig Data
morexGenes
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Map Locations of contig_280187 (3017 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_280187

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_45692 1 980 bp AK358405 Available Available None





CDS Structure of MLOC_45692






Contig Sequence (3017 bp)

>contig_280187 3017 assembly3_WGSMorex_rbca.fasta
TCTAGATCCCGCCAGGAGTAACGATCACCGGCGGGTGTGTCCGGGGCGTTACATCGGCAC
TCGAGGAGCACCACCAAAAATGAATTCTTCTAGTGTTGTCGCCCTACTTGACACTACTAC
TCCCGAGAGTTATCAAACTCCTTGCTCACTCGTTCATCTCGAGGCCCCATCCGTCTAACT
GATCCTCCGATCCCAGTCACCATAACCTTCTCCACATCTGTTTACAACATAAATATTGAG
AAGCCAACATGTCCCATGGTATCAAAAAACAACAGAGTTCCGTATCACATCCTCATGGGA
CCTCGGAGGCTGAAATGAACGTGCGCGACCGAATTTTATCTGATCCAGATATCTTGTGCA
AGATCTTCGACAACAGTTGCGGGACAAGTCGATGACCAGATCGAGGAGGACTGACCATGC
AGGATGTTGCCGTGATGCAAGAGGAGCACGAGGACCGCCATCTTCATTCACGGCAGCAGG
CCCCCACACTGCCCAGGGGGAGCCCGACCGCAACCATGGCCAAGCACCAACCCAACCAGA
TCCGGATCCAGATCGGAGGGATTAACACGACCACGGGCTACAACACACGCACAACCACCA
CCGTCCTCCTGCCATCCCGAGGCACCTGCGACCTGCTCGGAGGAGCACATCACCATCAGC
CGCCGCAAGATCCCCTAACTCGACGTCAGCCACCCGGGGACGCCAACGCCACGCCGCCGC
TAGATCCACACGAGCTTTGCTCGACGAAGACGATGGGAAGGCGGTGAGGTGAGGGGTAGC
ACGGGGGAGGCCTCGAAAGGGCGTGGATTCACCTTTGCCCGAGTCGCCCAGGAAGGATGA
CGCGGGGGCCTGAGTCCTTTGTACCAAACGAGTCGATCCTCAGATTTAAGATATATAGAT
GCAGGAAGATATAAGGGATGGTTTAGTGCGTTCGCGGACGTAGGACATCGGATTTGATTA
GTCCGGCTCTAGATGCTATAAGAAATCGGCCCATTCCTCGTTGTTCATATCTTTCCTACG
TATAAAGGTTGAAGTTGGTAGTGAGTTCACATGTAGGACCAACAATCTTCATCAATAAAC
AAATGCACCACTACCCATATTGAGAATAGCCCTCTTCCATGAACATAAATAAACAAATAT
ATTTGTGCTCACATGTCGGACCAAAGACAAATAAACAATACATTACTATTCATGTGAGAC
TAACACTTGGACACAAATAACAAATGCAGAAATGCGACTCCAACTTAATATAATGCTCTT
GTCTTTTTCTTTTCCAACCAAGTTATTTCAGTTATATATCACAGAAAAAGAGAGTGAACA
TATTGTAATTCGAAAACGATGATAGACCTTATCCTCCTACCTGATCCACGACCTTGTGCA
GTACCATTGTCTATTCTCATATGTTTCAACATTTAAAATGTTGTGTTTGTAAAGGATCAT
AGTCATTTAAGATTCTTCAATGCCTGACCTATGATATTTTGTGATATTTTTTATCTTTCT
AATAGTGAAATGTGAGCAAATTTCTCATGGCACCACTGTATTTTAACAATTTTCTAAATC
AGTGACCCAACTCGAGTATTTTATAGTTTCGTAGCAATACACGGTCATTGTACTAGTAGA
AAAACAGGTTCATTTTCGTTGGTAAAAAAGAAAAATAAGGAAAATTTCAGCCTTTTGGTT
TGTCTCTTCAGACCGGTCCGGACATCGAAGCAACACAAAAGTGGCTCCAATAAAATCTAG
CGAGGACAGGAGTGCACCAACACAACACAAAGCGACGCCTCCAACTCAACTCAAAACCAA
TCCGATCCAATCCAGCAACAACCAAACCGGGGAGGGCCGCTGCTTTTCCTTTGCAGCGGG
CGGGCGGGCAGCATTTCAACTTGCTGCCGCCCTACCCGAAACACAACAGGGCAAGGCAGC
CCTAGCCTCTCCAACCAATCTGCACCACCAGCACAACGGACCCTCCATAACCCAAGTACA
CAAGAACATCTTGAAACTGAGGAATCCCACGAGGAAGGAGGGCAGCTAAAACCACAACGA
CACTTATTTTGTACTAACTAACGATAAGTAGTATAGTAGTACTCAGTTGTCATATTCTTA
CTTGGGAAAGTGTTTCATTTGCCACTTCTCTTATCAGGATGTTTGAGAGAGATGTTTCGA
GAGACATGACAACATGGGAAACCGCACTGAATTTAGTATCTACCACTGTTAGACAGTACT
GTATTATTTCATTCCATTCCATTTCATCAGTGGAGCAGTAATAATTTACATGAAACTGAG
CAGAGCGAGGAGGGCAGAGAGGATCTCGCTACAAATCCTCTATCACCTAATAATACCAGT
CTCCTCCTCACCTTCTAATAGGAGTAGGAGTAGTATATCTTTTCCTAAAAGCTAAATAAA
AACTTGGTAGGAGGGAGGGAGCAACAATTTACAGCAGAAAGTTTGATGGAATAATTATTC
CCAAATTTCTATTTCATCTCGAGGCTTCTGAAGTCGAGCATGCCGGCCCTTAGGCCCAGG
AAGTTGCTGCTGCAGCTGCACTCCGTCGCCGCTCCTCTCACTCGTAGGATGCTGCAGCGG
AAGCAGAGGCCGCCGCCGCCGCCCTGCAGCTGCTCCATCTTGACCGGCTTCGCGCATGCT
CTCGCCGGCGGCCGTTCCTCAACCTCTTGGAACGGCAGGCTGATGCAGAGGTCCAGGTTG
AGGTCCGGGCACCTGGGCGGCTTGCTCTCCTCCGTCACCGGCTCCGCCTTGGGCGGCTCT
GGGTGGACAAAGGAGACGGTGGTGCCGGCGGCGTCGGTGACGGGGCGGTGCGTGACGGGG
TCGATCCCCCTGCCGAGCAGCTTCCTCCGGATGTGCGTGTTCCAGTAGTTCTTGATCTCG
TTGTCCGTCCTCCCCGGCAGGCGCGCGGCGATGAGCGACCACTTGTTGCCGAGGAGGCTG
TGGAGCTTGACGATGAGCTCGTCCTCGTCGCGGCTGAAGTTGCCGCGCTTGAGGTCGGGG
CGGAGGTAGTTGATCCA