Contig Data
morexGenes
Links



Map Locations of contig_279055 (2127 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_279055

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_45556 10 1520 bp None Available Available None
MLOC_45557 2 1167 bp MLOC_45557.1 Available Available LOC_Os03g56869.1, FRAME:-2, EVALUE:2e-11, 13103.m06218 protein ribose-5-phosphate isomerase A, putative, expressed





CDS Structure of MLOC_45556






CDS Structure of MLOC_45557






Contig Sequence (2127 bp)

>contig_279055 2127 assembly3_WGSMorex_rbca.fasta
GAGTTGCCGAATCAATATTCCTATACTGCTACTTGTTTGCTCAGGCAAGCCGGTCATGTA
TATATCCTTCAGATATTCATACGTGGTAACACTAGTCACCATTCACCATGTCACTATCTT
GTAGAAGTACTTTCTACCAGGGTGCAGCCCCTTCATTGCGCTGTCGAAGATGAGACCCAG
GGTGGCGCCACCCAACGCCATCGTTCGCTGCTGCTTGTTTGCCCTCATGACTGCTGGCAT
GTCTCCTCATTCCCCCTCGCGTCGGCCGGGCAACCCATACCTTAGAGAATGCATAACATT
CAAACAGTCAGGATATTTCTTTTGTCTTCTATAGGACATGGAATCTAGCCATCAACTCTT
TGTGACAGATTCTATCACATTTTTCACACACATCAGGTGGTTGTACGAATAGTTACATGC
TACTCAAATTTCTTTGCATGCCACAAGGGAATATACATAACCATTCATTACCACACCGTC
GTATGAATCCTCGAAGTCTGGCCAAGGTGTGCCTCTTGTTTTTTATTTTCCTTCAGAAGG
GGCGAATGAAATGATACCAACTTGCAACGTCACAGGGAGCACTCCCCTAATTCCCTGGGA
TGAACAACTGAATGATTATTCTGCATCTGCGGAATTTGAGTAAAATTACAGATGTTAAAA
TCATCATGAAGAAGCTATGATATCAATAAAATCATTGTATTCTTGAAAATAAAATACAAT
GCTTTCAAATGGCCTTACTTTTGCAAGAAAGATGTCTTTCACATAAACTCAATGCCCCGT
GTGTTGCATTCAGTGAATTGGTACATAGACATACAAAGACATGATATTGTTGTGCATGAT
TCAGAAAATTGTGGAGTCCCTTTATAAACTAAATACCAAGGGAACTTTCTATATCTTTAT
TGAGAAGTGGCTTCCGACCAAGAGCTGAAGAAGAACACTATGCAAATCATCAAAATTTAC
GGCTAATAAAAAAGCATCAAACTCCATATTCATACCTGCGACCAAACGGAGTATAGCATG
CTGTGGTTGGATCCCCAAATAGTATAATGTGTTCAAGCACATAAGGAACATACTCAATGT
TGCATGTCAAATAAGTCAATGCATAGTTGCAACATGCTTTAGGAATCCCCATTAGATATG
TGTCTCAATCATCCCTACGGATGTCACATTTTGCTACTCCTTGCTCCATGGATGCAAGTC
ACTGAGAAATACTGTCAGCAAAACAAAACATGTACGCATTTTAGTTGGAAAAGATGCCCA
AGGCCATACTTGGGTCGCTGGCCAGCAGTTTCTACCAATAATATTCTAGAAGAGCAAAAC
TGGTATAATATCTCACAAAACTCTCATCACATGTTTGCCTTAGATAAACATGTGATTTAG
AATACTAACATAGTGTTACAAATTATCATGTGGTCCACATCCACAATGCCAATGATTTTT
TCCTAGCCTTCTGCTACCTTTCTTGCAGGGTGGACAAGTGGTGGCCGGAGGAACCTTCTA
AAAATACCACTCAAGACACAGTTGCTAATTTATCACGTACAATTTAGATCCTTGAAAAAT
AACAGGTACTTGTGACATACAAATCAAGATCCCGGATTGGGTTGTGAAGATTACATCAAA
AACGTGATGGCCCCCCTTGGTGAACAGTGGGAATTAGCCTCCTGATGGATCGGCAGTACC
AATTGACGGTCTTCTCCAAACCTTCACACATTCACGTAACTTGGATTAGTGGAATTTTTT
TCCTTTTTTCCTAGTTGGTGCAAACAATGGACAGACTTCAGGTTCAGAAAATCAGTAGCT
ACTTAGAGTATATACGACACTAAAAGTAATTATCATATTGAAGAGCGGCTCACCTGTGCG
TCTCCTAGGAAAAGTAATTATCATATTGAAGAGCGGTTCACCTCTGCATCTCCTAGGGAA
GCTACAGCTCCATTGTGCACACCTCGGGGTTCGATATAGCCCTCGCCTGCAGAAGCAACT
GTTCCCCATCCTCCTTGCCTCAGCCATATCGAACTAAATGACATCTGCAGGGAGTAAGAC
AAGACGGGAGGCCTCGGGCAGAGGAAGGCGAGGGATGGGCATTGGAACAATGCGGGGGCA
CGGGGATGCGACGCGATGTCGGAGCTG