Contig Data
morexGenes
Links



Map Locations of contig_278481 (2947 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_278481

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_45494 1 1241 bp MLOC_45494.1 Available Available LOC_Os06g37510.1, FRAME:-2, EVALUE:4e-55, 13106.m03884 protein tetraspanin family protein, putative, expressed





CDS Structure of MLOC_45494






Contig Sequence (2947 bp)

>contig_278481 2947 assembly3_WGSMorex_rbca.fasta
GGTTTGAGGGTTCTAGTCTTTGCCTTTGTTTTTCAACCCTTAAAAGTGTCAAAAATGATC
AATTCTCAACCCTTAAAACTGATTTTGGATTTAAGGGTTTGAGGTTCTACTAGAGATGCT
CTTAGTACTACTACTGCTACCTCTATCTAGCAGACACTTCAGATTAAAAACCCTGAAATT
AGTTCGCTGTAGTCCTGAATTTACCAATTAACTCTACAATGCGGGCAATGAACGTGATTA
CTCGTGAAAACTGGAGCAGTTAATTACTACCTGGAGCGGCGAGAGGTCGGACTGGTAGAA
CTGCTCGGGGGCGATGAAGAAGGCGGCCTCGACGGTGAGCTTCCTGCAGGTGTCCGACGC
GGCGAGGCACGCCCTGATCCCGTCCCACCGGCGCGGGTCCCCGGCGACGTACCCGCGCAG
CCAGCCGGAGAAGCCCTCGAGGCGGTACTCGCGGTAGGCGCGGCCGGGCACGACGTAGGC
GCCGGAGCCGTGGGTGACGGCGAAGGCGAAGACGAGGAGGGCCAGGAGGAGCGTGATGAG
GGCCGCCATGGCGAAGAGGTAGGCGGCCAGCAGGCCCTGTCGGTTCCAGTAGGCGCCGAC
GAAGCCCGCGAGGGCGACGAGCAGGAGGAGGCCGCCGAGGATGGCCACGGGCCAGCGCGC
CAGGCGCGCGCACTCGGCGCCCTGCTTGGACGCGAACCAGAGGCCCGTGGCGACCACCGG
GATGGTGCAGATTAGGGCCAGGAAGTTTAGGCACGCCGTGATGTTGTTGCTCACCGCCAT
GGCCGCGGCGCGGGCTGCCGGCCGGACGGCGACGGACGGAGCGGGTGAGTGAGAGTGGGC
GAAGTGGAGTGAGCCCGTGACTGTGAGTGAGACGACTGACGAGTGACGACTTGGGTTTCT
TGGTGGGGCGGACACTTTACTTCTTGCCCCCTTGTACAATTTCCGGGGTACTGTGCTGCA
CCTTCGGGGCTGCAGCGGTGTACGATGGTTGCTGGGAAGCGATGGGGGGAGAGATGCTGG
GTGGAAAGGAAGGTGTGTGAAATAGAGGACACGGGCACACACTGCTCGGGCAGACTGCAG
CGAGAAGCGTGTTGGATAATGTACCCGATGAGATCGATCGCGGAGGTCGGCAGCGGCAGC
TTCCGTGGACGCACGCGCACGTGTCGTGCCGTACGCCGGTGAGAGGAGAGAAGGCGGCGC
CGATGCCACTGATTGACACCGCCGGCCGTGCTCCTGCGGGCAATATGGCCCGTGCCAGCA
TGCCGACTTGGTTTCATCGGGGACGGGGAAACCGCAGATCCGTCCGGCGGGGTAGGGTGC
GCTTCGGCCGACATGCCACTATCTCCAGCCGTTTGATCGCCGTAAAATCTTTTTCTACCT
CGGTTGAGGTTGCCCCAGGAGGAGGAGCATGCCCGTGTTGCGTTGCTGTCGTCACCAGCA
TAGCCCGGGTCGATGGAACAGGCGGTGGAGGCACACGCAGCAGCACATCAGCATTGTCTT
GAACACGGCGTTTCACTGAGCCGGCCTTACCTGATCGACTTCACCGACGCCGAAGTCAAC
AACGAGGACTCCTAGGGCAGCGCATTGTGTCATGGTTTAAGGCTTTTTAATATTTAATTA
ACGTAATGGAGCCGTGTGGAGGTGTCCGTCGGACCGACCTAAACGGACAAAATGCGAACA
AAAACGCCGCTTGTTTGGGTCATTTGATTGGAGTGGGAGCTCCTAACTGCCCCTCATTGC
GGCAGGGACTCCTGCGCCACACAGGGCGGACATCCTGAATGGGCCGGCCCAGTTTTGTTT
TTTTTTTCTATTACTTTTTTTCTTTCCTGTTTATTTCCTTTTTAGGGTTCGTTTTTTCTT
TCCTTTTTGAGTAAATTGTCAAAAACTGTCACATTTCGCGCAACCGTGTCCAGTAGCTAT
CATTTTACGATTTTGTGCGAAAAACTATCAAATTTTTTCTAATCTATGGTAAAAAAAACT
ACCAGACTTTTAACTGAACTGCCCGACCGATTTGATTTAGCTCTTTTAACCATTTTTTTT
TTCTTGCAAGCAAGGCTGGCCCACATGTCAGGTGCCAGCATGTTCCGCGCATTTCATCGA
ACAGCTTCAGCGCTCACCACGTCGGCGCTCACCGCGCTGCTCGCGGCACGGCCGGCGGCG
GAGCCGTAGTACTCCATCTCCGGCTGCACGAGGGAGGAGGTGGAAGGAGCCGGCGAGCTG
CACGAGGACGAAGCAGGCGAGGAGATGGAAGGAGCCGACGAGCTGCAAGGTGTAGCCCGC
GCGCAGGTCCTGGGAGTCATGGAGGAGGCGGTCCAGGTAGAGCAGCAGGCGCAGGCACGG
CGGCGGATGAGCGAGGTGAGCGTGAGGTAGGCAAGCGCCGCGGAGAGCGAGAGCGAGAGC
TGCACCTGCGTGTCGTAGGCGCGGCGGGGCATGGCGACGCGCGCGGCCACCGGGACGGCC
ACCGCGAGGACGGCGAAGACGAGCCACATGGACGCGGCGCTGAGGCCGTGGCGGTGAACC
CGATGACGATCTGCATCTTGATGACGAGCGTGTACGTGACAGCCGAGCCAGTTCGCGCCC
CGTGCCTCGCTTGGCTGAGCTCCATGAAGGGCAGCACGATCTCGTAGATTAGCGCCGCGC
CCAGCGTCATGTCGAACCCGACGTAGTACTACGACCGCGTCACCCCCGCGGGGTGGTCAC
CTTCGGCGTTCATGCCCAGCATGGCGGCGCCAACGCTGAGCAGCACCACGGCGTTGACGG
AGAAGGCCGTGAACCGCTGGCGCACGAGTAGCAGCGCGAAGGCGGCCGTGAAGGCCAGCT
GCGTGGAGATGAGGATGGAGGAGGTGGACACCGGGAGGTACGCCAGCCCGTAGGCGTAGA
GGATGTCGTCGAGGCCGGTCATGAGGCCGACGGCGACGACCGCGGCCAGGAGGCGGGGCG
ACATGAG