morexGenes - Barley RNA-seq Database

Contig contig_278203

Source Contig contig_278203

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_278203 (2507 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
	No map location	No map location

Predicted Genes from contig_278203

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_45465	1	733 bp	AK353667	Available	Available	None

CDS Structure of MLOC_45465

Contig Sequence (2507 bp)

>contig_278203 2507 assembly3_WGSMorex_rbca.fasta
AGCATTGACTTCAAGATAAGGACTGTTGAGTTGGATGGCAAGCGGATTAAGTTGCAGATC
TGGGATACTGCTGGCCAAGAACGCTTTCGGACTATAACTACTGGTATGGTTGCATGCCTT
GAGCAAAAGCAAGAGTGTTTCTGGTTTCTCTTGATTATATTGATGAAGTTTGTAAAATGT
GATATTCTTCTTTGCAGCCTACTACAGGGGAGCCATGGGCATTTTACTTGTTTATGATGT
CACGGACGAGTCGTCATTCAATAGTAACGACCTGAACCTTTGTGCTTCAGATTCTCTTTC
AATTTTGTTACGTTTTCTGATTATCTCCTTTGTTCGCAGACATAAGAAATTGGATCAAAA
ACATTGAACAACATGCTTCAGATAACGTGAGCAAAATTTTGGTGGGGAACAAAGCGGATA
TGGATGAAAGCAAAAGGGTATACTCTTTTATCTTGACTTGTTTCTAGCCATGTTTTTTCT
GTAGTCGTTTCATCTTAACTTCGTGTTGCGGACTAGTTTGTTTCGTATGCAATGCAGAAA
ATAGATAATTCACCGAATTATATTCAGGCTGTGCAGATGTTACTACTTGTTAAAATAGAT
TTAAGCTGCACATATGTTACTCTGATACAATTAGATGTGATGCAAACAAAAAAGAAAACA
TGCTCAGCATTATTATCCTTACAGTTTACATTCATCTCTCTCTTAAATGCTCAATTGCTT
TGATGCAGGCTGTTCCCACTTCAAAGGGCCAGGCCCTGGCCGATGAATACGGGATCCAGT
TCTTTGAAACGGTTAGTGAAAGTCACAACCCTTCTACCTTGCTATATGTAGCATTTAATC
GCTGCACAGTAGTGAAGTTTTATGTTGATTTATTTGTATGGCATATTTCTAAGCAGTGGT
GCCCAACTGCTGATACCTTAGCATTTGTTTCCCACACATAATCCTTTATATATTACTGTC
CCTGCAGAGTGCAAAGACAAACATGAATGTCGAGCAGGTTTTCTTCTCTATTGCAAGAGA
CATCAAGCAGAGACTCTCGGAGGCTGATTCCAAGCCTGAGGTATCCCAATCATTCCCATA
GTTCTGAAAACATCTTTGCGATTCCCACAACTGGGCAGTGCCTTACAGTAACCTCGTTGG
TTTCAGGGGGGAACTATCAAGATCAACACGGAGGGTGATGCCAGTGCAGCAGCAGGACAG
AAGTCGGCTTGCTGTGGGTCTTGAACCGTCGTCGCCACGGGAAAAGAGATAGTTGCGACA
CGGTGCTTGTAATTCTTGTCATTCCATTCTTTGTGTGCTGGTTTCGTTGTGTTATTTAAG
TTATTGCTGTTGTTAGGATCTGGACAAATTGGTGTTAAGTCAGAGCAATTACTTGCAGTA
TCGGTGGAAACTTTTTGTTTTTGTTGAGATGAAACTCTGGTATATTCTGATGGCCGCTAA
ACGTTGGGAAGTTTTTGGACCGCCTCTCGTGGTAACTTGCATCCATAGCTGCTTAGCAAA
TGGGCAGTCTCGTTACATGCCTGTGGGCAAAACTCGATTGTAAAATCAATAAATGCCCAT
ACTCGTCGCATGAGCACTGACTTTGTGCGAGTCAGTCATTGCCTGGGCGGCAGCACTGAC
TTTGTGTGAGTCAGTCATTTCCTGGGCTGCAGCACTGACTGTGTGAGTCAGTCATTGCAC
ATTCTGTAGGCCTATTTCATCGGGGGAAAATGCCGTTGCTATCGTGATTCCGTGGCACAA
AGTCTTGGCTTGGGTCGCAAAATAGGAATGGTGGGTGCATCAGCGGCAATGCGGCATCAT
CGTCTGGGCTGAAAGTTTGCCAACCAGATCCTCCTCATCCCTGCAATAGGGTCCTTCATG
GAAGAACAGCAATCACACCGCAAGGCCGGCGGGTGAGGCCTAGGACGTGTTTGGTTCCCT
GCATTAGGCCAAGCCTGACCCGCGTGGAAAGGAAGTGGCCCATTTGGTTGCGTGTGTTTA
CTGTGCGCTCGCATGGCACGAACCTTAAAGCACCTTCAAGCCAGCTCCAGGGAAAACGCC
CGAATCAACAGTAGATTGCGAGCCAAGCTCGGCCGACGCAGGGGAAGGCGACGCGCTTCT
CTCCTCGTGCGACCAAGGAGATGGCGCGAGCTTGCCTGCGTCGCCGAAAAATCGGCGGGA
GGATTTCGGTTCACCTCCAGCCGATTATGCCCCTATTTGGCCCCCTCCCTCACCGCCCCA
ACTCCCGCCACCATTCTCCCCCCTTTCGAGCTTTCCTGCCGACGCGCATTGGCACCGACG
ACCAGGTAAGCGACGCATTTTCATCGGTCGGCGGTCCACGGTGTCGGTGGTCCTTCACCA
GTCGGCGGTGATCTTCTACGACCTTTCCCCCCTCGTCCTCGAGCTGCATCCATGGCCTCT
GTGAGTTCANNNNNCCTTTCTCTCTGTTCCTTCTAGCTAGATCTGAGCTGCAGCTAGGGT
TTGATGTAGATGCATGGTTGATTAGTGCTCTGATCTGTGAGCTCATA