morexGenes - Barley RNA-seq Database

Contig contig_278081

Source Contig contig_278081

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_278081 (2021 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
No map location		No map location

Predicted Genes from contig_278081

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_45449	1	446 bp	MLOC_45449.1	Available	Available	None

CDS Structure of MLOC_45449

Contig Sequence (2021 bp)

>contig_278081 2021 assembly3_WGSMorex_rbca.fasta
CTCACATTGGGTGCATGACCATAAGGCCTCGTTCGGCTCTGGTGTTTTCTCACACCCAAA
ATGCTTGCGTATTGGAGGGGATTTGGTGATCCCCTCCCCTCCACCAAATCCTCTCAATTC
CCGAATAATCCCCCACCCCAGACCTTGTTTGGTACTAGAGTTTTTAAACAACTGCTGATA
AGGTTTAAAATTAATATATCTAACCACAAGGTGCATCATCAAAAAAAATAAAATAGCAGA
CACCAAATGACATAACTTAGCAGACATCAAGGGGCATAAAATAACTGCTGATAAGGTTTG
GAACAAACACCAAATGACATAAAATAGCAGACATCAAGGGGCATCATCGAAGATCCGAGG
TCGATAATTTATTGAAACATCATGTCATCATCAATAGCAAACTGACTCCTCGGAGAATTG
AAACATTCCATTTGTGCAACAAGTAGGCATTGAAAATAGAAAGCGACTCCCAAATAAGGT
CAACCTAGTTTGCTTTATTTTACATGACATAAGATCAGCAGGAGGCTCAAAACGAGTGCT
GGTAAAATCCCAGTTTATGAGACGAATCACTTTCTGGCAGATCTAAGGGGCTAACACTGA
CTGCGCTTTTCTTCATTGGGTGCTTGTTGCCAGTGCAACGATCTCATAGCTGCAGGCTGC
GGAACAAAACAAAACAAACAGCAGTCAGTGTAACTGTCAAGTAGATCTATGTTTTTTATC
TGCATACACATCGATACAGGCTAATAAAATCATCCTTTTATGCATATGTTTTTGATCCAT
GAGTACACTGAACATGGATGGATGGCTTGATTAACAAAGAGGACGACGGGTTGTTATTTT
ATCATAGAACAATGAACATGCAGTGCTGAACATGTAAATGTGCGAGTAAATGAACATGCA
CTGCTGAACATGTAAATGTGCCAGTAAATGAACATGCAGTGTTGATCTGCATATATTTTT
ATCATAGAACAATGAACATGCAGTGCTGAACATGCATATATTTTATCATATATTTTGACT
TATTTATTAGGAGATGGTTTGGTTCTTACCTTAGTTCTGAACATGTAAATGTGCCAGTTG
TAGATCTTGCCATTGGACGAGGTGTCACCACTAATAAAACAAGGCGTGTTTCTCTTAATT
GCATATACTAGTTAACAGCAAAAGAAAAATTCCGCATAAACAAGACAGCATAGCCTTTTG
TCTACCACTTCATGTTGGCACGTCATTGAATAATGCAACCTTTTTCCGCAAAAAAGCTTC
AAATTTGCACCTACTCTATGCAACTCTACTTCCTGAAATGCCAGAAAACACAGGAACATA
AATCAAATATCATACACACTTTAGTTGAATAACTTACCAGCTGTAATTTATCAGCTTGTT
TGGGATTTTGCTCGATTGCTTTTCTATACACCTTCGATTCAGTAACATAACATATAGTTG
ATATGGTCAGGTACAGATTTTTACAAACAATAACTTATAGTTGCAGAATAAAAGCATCAT
CGTTTGCAAATTTTATCACGAAAGAACCTACATTCGACTCTACTACAAAATTATATAACA
AGTTATGTCTGCAAGTTTTATCAACTATCACAGAATTATAACAAGGAAGAGATGTAATAT
ACCATCAACTATCACAGAATTATATAACAAGGAAGTTATGTCTGCTACCTGTCTTGAACA
TACCTCATGGGGACATTTGGCTCCGAAGCCACATAACAACAGTATCTTTATCATCATCAG
CAGCATTGATGAAAATCTCACGGTTTGCTGCATCCTTGAAGACGTTGAATGCTTTGATCT
TCTCGATGCGGGTCACATCATCCATTTTTTAACACATCCATGCACTTGGTGATTTTTTTC
TACCACTTCTTCACTTGGATTGACATCCTCCTTCCTATGTGCAACATCCATTTGATCCAG
AATTNNNAAGTCATCTTCATCATGTTGCACTTGATTCATCATCTCCAAGTCATCACTTTC
TTTTACTTCCTCAACCTCTATTTCATCTTCAAAGTCTTCGT