Contig Data
morexGenes
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Map Locations of contig_277690 (3457 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_277690

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_45395 2 465 bp MLOC_45395.1 Available Available LOC_Os12g36240.1, FRAME:-3, EVALUE:2e-17, 13112.m03715 protein inhibitor I family protein, putative





CDS Structure of MLOC_45395






Contig Sequence (3457 bp)

>contig_277690 3457 assembly3_WGSMorex_rbca.fasta
CACGTAAAACATGCTACAACAAATTAAAGGACGTCTAACTTATTTTTGCAGGGNNNNNTT
GTGATGTGATATGACCAATGACGTGATGTGATNNNNNNNNNNNNNGAGATGATCATGTTG
TAATAGTTTTTGTTTCCCATGCGACTTTTTCCAACAAATATGTCTTTTTACAATGAAATT
CTGGCTTAAATATGATTGGTAAATCACAATGAGTATGTAGGCTGGTTTTGTGTGTGTAAA
TAATGTAGGCGACTCCGGTAGGAATGGTGATGACATGGCTGAAGGGGGTCCTAGGAAAAT
CATGTAGTGGGAGCATTTATTTAGATATAGAAGCTAAAATATAATATTGTAAATTGTAAA
ATATTCATCAAGAATGAGTAGGATGCAAAATGTGTTCTAAAGGTGGACTTTTTTCATGCA
TCGTTGATTGGTAAGAAATTGGAGTTAGTGCGAATAAACTATAGGATTCCTCAGACAACA
TGATAAAATGACCACCTAAAAATTAGATATTAATTAAACCTTGGATTTAACATAGTTACA
GACCTGTTGCGCGCCAGGTCTCATTCCATATCTGGTGAGAGTAAAAGTATACGAAACCAA
AATTACGTCCATGGTATGCTGATGTTCAACATGTCTTTATTCCTCCATAATATAAGTATA
CCATACAGAAAGTTCTTACATGATATGCTGATACTCGGCATGTCTTTATTTCACCATTAC
ATAGTTATTTATTATCCATGCACGATAATATTGTTAGCCAACCGTAGGGGTCCTGGCGAC
GGCAACGAGAACGAAGACACGGTTGGGATCGAAGTTCAGGTGGACCATCGCATCGACCGG
GATGACCTCTACCTGGGCATTGGGCTTGTCCCGAAGGATGATCTCTTTGGCCTTCTCGGC
GGACATCCCGACCACCTCCGGCCATGATGTTTTAGCACTGCTAGCCCCGATGCTCCCTTC
GGTAGGCTCTGGGTACTTCAGTACACTTCCCTCCATGGAACTCATGTTCTTCAATGAACT
CTAGGACCAACATAATTACAACATTAATAATATAATTCCTGAAAAATGGGTTAAAAAAAG
AACGATCATGTGTTACACACATTCACCTGAATAATTGTTTAGATGTCCTCGCTATGTAAG
AAGATGTTGATGGTATGGCATCTACTTGTGAATCTTATTTATACGAGGCAGTTAACTAAT
TTGAGAAGTACACCATAGTGTACACACCAAGTAATCATCACATGGTGTGCAGCAACATGA
CATTATATCATGCTAAATTTTGTCTTGATAAGCATGAGTGACCTGGCTACACATCATTAG
ATAAAGTGATGCTTATCTATCATAAATAAAGAAATTGGTATCTGATGAAATCTAAATGTA
CATGTGTATCCATACTTGTCACCATTTACTCTCTTAATAGAAGATGCATGAGATGCCCTT
AGTTTTTCTTGGGGACGAGATACAACATGTACTTAATTACCACGGAAGCAAGAAAACAGG
TTGACATATAGAAAACGTACATAAAATGTTAGCAAAAAATAAAAGAGAAAATGTACAGAA
AATGGCAAGAGAAAACGTGTTAACGCAAGGATTATAAGCTTCATGAATTCACGTCATGGA
TGGTTCAAGGTGAAAAGATATCACATTTCATACGTATCACTAAAATTAAATTTGTGTTAT
CTATTTGGGTGCATATCTGTAGATGAACTAATGCTTATTTCTAAAGGAAAAATGTGGTAA
GCTGCACCGCCAATGTCATTAAAAAAGTCCATTAATGAGATCAAAAGGCTACAGTCCTCC
TCTTTCTTAACCAAGAAAAAATCCCAAGAAGTACAACAACACATCCATACTGAAAAGAAA
TTTGTGATGGGATGCAAAAAGGAACAAATAACAAACAAACATAGTTTGACAGGGATACTA
GTCTAACATAAATAAATGCAAAAAAGATACAAAAATAAAGGAAAATAATGAATCGATGGG
TGCATGAGTGTAGGCTTGATCGGATTATAAATTGTAAAAAGAATTCCACAAATCCATATA
ATTTCCCGTGTGGTAAGACGAGCGCAGTAAAATTGATGCAGAAGTGTTACTTAATTTGTC
TTCTACAATCAATAAACACAAGCGGTTGTTCTGACATTATTCAAAAAAATATTAAAAAAT
TGTAGGGTGCGTCTGATAATTTATTTGACTTTGTACGATGAAGCATCATGATAACTACAT
TATGAACATCGTGTTAAATTCCGCAATTATATCATCATCATGGTGTACCACATATATAGT
CTGGCACGTACCACACTTTAGAAAACACTATTTATTGTGTTTTGATTGGCGAAAGAGAAG
AACTTAAGTACATTCCAGCTGAAAGGGAATAAAAAAGGAGGAAATAAATCTCTCACATTT
ACGAGAAGCTACAATATCATGAACAATGACTATGTGTGATTTTGCTACAAACAGGAAAAG
CATAAGAATACCGCATAGTATTTATTCTCGTTGTCCTATGCAACCTAGCCATATGTACTT
CAAAAAACGAAGTTTATAAGAAAGAAAAGGAAAAGTTCTTCTTTCAATTCTTTTTATTTA
TAATATACTCATTTACCCAAATGCAAATAAATTTCAAAAAATCAAATTGCGGTCTATGAG
AAATAACGGTCGAAACGTTAGCTCGCTACATTGCGCTATATAGATCTAAATGTTGCTAAA
CGGCTTAGAGTGATATATACCCCACAAACCTCTATTGTCAAGAATCGCTCAAGAATGTAC
ACATAATAACATTTTCTTCTGCATGCAGAACAAAGAACACATTTTGTTTAGTGGATAGCA
TGCCAGCATGCGGCAGCATTGGCATGGCATAAGATTTCGGGTTCAAAACCCTGCGGTGGA
TGATAATTTTCTCTTGTGATTATTTCAGCACCTCCATCAAGATGGAGATGGATGTTGACC
TACGAAATGTCTACGGGTAACACCGATGTTTGTATTATAAAATTTGCAACACATGGGTGC
GCGTCCCACATCATCAGTCGGAACAGATAGTTCGTGAGGACCCTTTCCAAAGATTACTTG
TAAATCATTGATCATATCAAGTATGCGATCACCAGTACGGAGGGCTGGCTTCTTCTGATG
ATCTGCCTCACCTTTGAAATGCTTTCCTTTCTTTCGACATTGATAGTTGGTCGGAAGAAA
TCTACGATGCCCTAGGTACACATTCTTTCGGTAATTGTCCAAATATATACTGTAAGTGTC
ATCTAAACAGTGTGTGCATGCGTGATATCCCTTGTTTGTCTGTCCTGAAAGGTTACTGAG
AGCAGGAAAATCGTTGATGGTTACAAACAACAAAGCATGTAGGTCAAATTCGTCATGTTT
GTTCTCATCCCACACATGTACACCTCTTCCAGTCCATAGCTGTAAAAGTTCATCAACTAA
TGACCTTAGGTACAGATCAATGTCATTGCCGGGTTGC