Contig Data
morexGenes
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Map Locations of contig_277612 (2409 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_277612

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_45378 1 465 bp None Available Available None
MLOC_45377 1 327 bp MLOC_45377.1 Available Available None
MLOC_45379 1 577 bp AK368865 Not available Available None





CDS Structure of MLOC_45378






CDS Structure of MLOC_45377






CDS Structure of MLOC_45379






Contig Sequence (2409 bp)

>contig_277612 2409 assembly3_WGSMorex_rbca.fasta
TAGATATCTCCTCCAAGTTCATGCCAAGCTTGTTGGGTGCCTCCTGAGGCCATCTCTGTG
AGAGGCACTTTGAGCCGATTGAGCGAACATTAACCATCTGGACCATACAGTTTGAGCAAG
CGAGTGAGGTTTTTGTTACTGTGATGATCATCTGTTTCATCCTGGGCACTTGGGTCCCAC
CATGTGATGAGCCTTCAACCGGTGGAAACTCACTTCTCCTCTTGCTTTCATGTTTGGAAC
CCTAGCTGCCTCCATCCTGCTGATGCATCACCCCACTCCCCTCTGTGATAAATCATTTTA
TCCACCGTAAGTTCATGCCATTTCTTAGACGCAAGTGATAAATCATTAGAACTACATATC
AGTTCTCCTGGTGTTATGGAGTGTTTTTCTTCCGCAATAACAATAGCTTGAAAAATGTTC
TTATATTGTGGGACGGAGGGATTAGATGATAGCTTGCGGTCAACTTTATAAAGAACCAAG
TATTGTGTGCATTGTCTGTTAGGTTGTTAGTATCTGATGGAGTAGGTCTAACAATATATA
GGTTGCAAAACTATCTTTTAATGCAAACTTCCTTCCCAACAGCAGGATGAATAATTTGTT
TGTTGTCGCTGTGGATGACATCATGCATGACAGTAAGTGGAATGGGCAATATAAATGCCT
TTGACAAAGAAACTGAGACTCTGTTTAAAAAGTTGGAATTTATGTAGACAAGGATATTAC
GCTACGAAAGAATGTCTACATATTCTGCTCGTTCTTGAGCGTATGGTTTATTTGCAGAAG
CCACATTTCTCAATAGTACACTTTACTGGTAAAGTATCAAGAAACTACACTTAACAAGTA
ATTTCACAAAACACACTTTTTTGTGTATCATGATTTTAGAAAATTACATCTCTTTATGAT
TACTTCAAATGTGTACTTAGAAGTGGGATGTTAAAGCCATCGGATTGATCACCTTGTTAA
ATCCATCGGATTAATTACATCTGTTTTCAATTATAACAAAACAAAAATGTACTGATGAGT
AACGCAGCTTCTTTTTTCCAAGCCCATGGGATTGATCACCTTGTGATTGCTAGAGGGTGC
GGATGGTGTCAACCCGAGGGTCCAAAGAGTGAGAGATCCTTTCGAACAAAAATGGGAATC
CTTTCAGAAACATAGGGGAAGGTCGATCGAAATAAATCCTTCCAAACTACCCCAAAAAGG
AAGAGATCCATTTTTGCCAGGTACCATCTCAAACTGCCAAAATGTCTCGTATATTTAGAA
AACAGAGGGTGTGCTTTTCCTCAACCAGATTTTTGAATTTGTGTCATCTTTAAGATTCAA
TGGTCAAACCTTCATCATGCTTAACGCTAAATTCGACTTAATTATCAACAACCAGCAAAA
CGAATCAATTCGTATGTGCATGGCCATCAAACAGGTTCAATTTACGAGCAACAGATGTGT
GATTGATCTAGGAAATGTATTATGAACACAGAAACAAGAACTGGACTAATTTCACAATCA
AACTCGCACACATTCAACTTGCAAACATATTCAAAATATCTTCAAAGGGCATTCAGAAAC
GCATATTCAAAGATCATCTAATGACCAATTACCAACGCAAAAAAAAACAAAATCAAACCA
TCAGAACCAAGAAATGAGGCTGACAATAATAAGCCAAAATAATCTTAGATTTAGTTTTCG
ACTCCTACAATGCTGACACAATATATTGTAACCGACAGAATACTCCAAAACCACACTATA
TTGTTACAAATTGTGTAAGAACTGAAAAGAAATAATAACATTGGAGGAGACACAAAAACA
TCCCATTTAACAGAAGAAGAAGAAAAGGCCTTGTTCATTCCCAGGCTCTAGCGAGAGTTA
GGCCGCCGTTGCCGAGAGACCAAAATCCATGGCTTCTTCGTTTCCTCGAAACAATAATCA
ACACTCATGTAACCTCGCAAAAATATACAGCTCAAAACTGGTTGTTGCTCACATCCCAGT
TCCTCTGCGGTGAAACACCTAAGCTATAGAGAATACACCATACGCTGCCTTTCACTAGAC
ACAGCACCTGAGAAGTGGAGCTGACCAAGAGCTGTTATATCAAGAGGCTGTTGCATGCTT
CGACTATAGCATCATGTGAACTCAATATGGCCTGACCTGCTGGGTTTGCTTCTAGGGTTT
TCGTCATGGAGTTGAATATTTCTTTGCGGAAGAAGGTGTCCTCCATTGCCTTTAGAATCC
CCTCTACGGCTTCAAATCTCAGGCCACCATAAAGTAGCAGACAGTCTGTGAGAAAAGAAC
CAATTATATTTCATATAAGTAATTGAGCAAAGAGACACTACGGTTCTACGAAGTAGGACA
CTATACATGATGCTATATTCTTCGGAGGATGTCCCAATGCCTATTATCATCAGCAAATAT
TAGCTTGAT