Contig Data
morexGenes
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Map Locations of contig_277601 (1626 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_277601

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_45376 1 1588 bp MLOC_45376.1 Available Available LOC_Os07g34920.1, FRAME:-3, EVALUE:1e-34, 13107.m03568 protein aspartic proteinase nepenthesin precursor, putative, expressed





CDS Structure of MLOC_45376






Contig Sequence (1626 bp)

>contig_277601 1626 assembly3_WGSMorex_rbca.fasta
GTAGTTCAGATATGACATTGAACTCTGCTGCCGAATGGGCTGCTTCCGCAATGACACTTG
AGTGAGCATATTTCGGGTAATGCAATGGACAGTGACCAATGTCAATTTCACGACAAGTTT
TGTGACTATGTATGATTTTTTTCTCTTCCCTTAATTTATTCAATGGAGTTTACAAGCAAC
CGGCTACGTACCCATGTCGACGAATGTCCAAACATAGGAATTAGCACTGCTGCCGGTTGG
TTCATCAAGTTCAATCCACACCGGCGGTGTCCTGAGAGCACGGCTCGGACGCAAAGGACA
GTTTGGCGTCTTTGAGGTCGTACACGAACCTCGTGTCCACCTGCTGCAGCGCGCCGATGA
CCGTCCGCTCGCCCGGACGCATGGCAAGGCACAGGGCGGCCCCATGGAGCCTGCTCTCCA
CCGCCACGAACAGCTGCTCCGGCTTCACGACCAGCCTCGCCGTCTCCTCCGCGAAGTGCA
AGGACAGCGACTGCAGATGCCGCTTGATCTCTGCGGTTTTGCGCACGCACAGCCCGTAGC
CTTCGCGCTGCACGCGCTCGGCCTTGTTCCGTCGTAGGTCACTCCAGACGGCGTCCTCCA
CGACGCGGTACGCCTCCCGGACCAGCACCGTCAGCGGCGTGCCGGGGTCGACCACGCACC
CGCCCTCCCCACCGCGCTGTCGGGCGAACATCTCCGGCCTGACCCCCGTCAGCCTCTTGG
CGTCCAGGCTGATGCCCACGAGGCTCACGTAGTACTGCGACTCGTGCGCGTCCAGCGCCG
GGAGGATCTTGGTCGTCCGGAGGCCCGACCGGCTCGGCACGTCGGCGCCGAACCGGAGGA
ACCCATGCCGGCTCGCCCCGCCGGAGAAGAGGCAGTACGAGAACCGCGTCTGCCCGCGCG
CCGCCACCTGCATGACGAGCGAGGTGGGCATCTTGCCCATGGCGGCGACGCCCGCGAAGG
TGCCGTGGCTGTTGAAGTGCCCCGTCGAGTGCGAGCACCCGAAGACGAACTCCTTCATTG
CCTCTGGCCCCATGGTGAGGTTCTCCATGGCCACGTAGCCATGCACCGACATGCCGCCCA
TGCCGGACAGGTGGAAGGCGCACTGCTGCCCCGCGGGCTCCATGGGGTACGGCGGGTGGC
AAATCTGGCTCGTGCCGGCCACTTGCTGGAAGGTGGACGAGGCCTTGGGATCGAACAGGG
GGCCGCGCTGTGGCTGCTTGGGATTGCAGGGCTTGCATTGCACCCATGTCAGGCTACCAG
AGGCGTCGAGCTTGAGGTTGTAGTCATGCCGGCCTTTGCCCGAGCCCAAGCCAACGACCA
CGCTGAAGGCCATATCGAGCGGCGAGGCCACTGGTGGGCGGAGGGTGGTGACGTTCGCCT
CCGATGGAAGAAGGTTGTCCAGCCGGCTCTGGACATGGAGGAAGCCGTCGTCGCTCANGC
TCAGCGCGTGGTCATGATGGGCCGCCAGCCGGAAGCTCGAACCGGCGCCCGAGCTAGCCA
TGGCGACTTTTGGGGTGTCCGCATCAGCAGTGGCACGCGGTATCTGGTGGGTCATGATGA
GCGCCATCAGGAACAAAATGCATTGGAGAGTGTTCATGATCGCCATGGCCATTGATGTGC
TAATTA