morexGenes - Barley RNA-seq Database

Contig contig_277567

Source Contig contig_277567

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_277567 (2751 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
No map location

Predicted Genes from contig_277567

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_45371	2	2234 bp	MLOC_45371.2	Available	Available	None

CDS Structure of MLOC_45371

Contig Sequence (2751 bp)

>contig_277567 2751 assembly3_WGSMorex_rbca.fasta
AATGAGATCAAGGAACGTCTGGTTGTTGATGAGGTGGTGAAGCACAACATGGATGAGACT
GCTGCAGAGGAGGAGAATGAAGTTCCATTCCTTGGTGCTCTGTTCCAGAGCGCAGCCAAA
ACCAGCGCGGCCAAGAAAGATCTGGCTGTTGAAGAGGATGCAAATGAGGTTTCAGTCTTT
GTTGATATGGCTGTTGAAGAGGAGAATGAAGAGCCATTCCTTGGTGCTTTGTTTCAGAGC
GCAGCCAAAACAAATGACCACAAGGATGAGCCTGCTGAAGAGGAGGACAACGAAATGTCA
TTCCTTGGTGCTCTGTTGCAGAGCACAGCCAAGACCAACGAGAACAAGGATCATCTGATT
ATTGGTGAGGTGCAGCATGAAGAGCCTGTTGAAGAGAAGGAAGACGATCTTGCTGTTGAT
GAGCCTGTTGAAGAGGAGAAGGAAGTAGCCACCTTTGGTGCTCTGCTTGAGAGCGCAGCC
AAGGCCGATGAAGATATGATTGTTGATGAGGTGCAGCAAAGCACAGAAGAGCCAAAGAAC
GAGATTGTTGAGGAATCGGTCACCATCAACCTCCTGTCGCAAGCCACTGTAACAGTAACA
GACGGCGAGATTGCGGCCAAGGATGGCTTCACCTGTGAGCTGACTGATGTGGCCGTTGAG
GTGGACGACGGCAGAGTGGTGACCGCCGACGATATGCCACACAGCCCAGCTATAATGTTT
AAGGGTGCCGTGCAAGTGGTCACCATCGAGAACCTGTCGCAAGCCACAGTGACTGACGAT
GAGGGTTCAGTCAAGGGCCTGGCAAGTGTGTCAGTTGAAGAGGATGCAGTGGTGGCCACC
ATGGATGAGAAAGTGGAGGAGGTGCTCGTCGTCGACTACCTGTCGTCGCAAGCCATGGTG
ACTGATGACGAATGGGCAGCCAGAGACAAGTGTGCCCAGGAAGTGGTCACCGTCGATTAC
CTGTCGCAGGCCACAGTGACAGACGACGAGTGGGCAGTCAAGGAGGGCACTTCCGCTGGC
GACCACTCGCCGGTGTTTGACGCCGCCGGAGACAGCAGCGGCCACGTCATTTCGCCTCTG
TTTGCAGGCCTGTTCGAGGATGCCACAAAGTTCCTGTCCATGGACTCGACCACCCTGGAG
GCAACAACGGTGCCTGAAGCTGCTTCTGAGAAAAAGGCTACTGTACCTGCTGTTGCAATG
GGAAAAGAGAAGGAAGTGAAGGACCAAGGCAACGAGTCTGAAGCGCTGGGCAGCCTGAGC
CTAAGGAAGCTTAGGATCCAGCTCAAGGAGAAGGCACAGGACCTGGAGAAGCCAGTGGAA
CGATTTTCCATTCACCCAATTTTTGAAGTGAGGGAAGGGAAGAAGCCATTGGACACGCTG
AGCCTGAGGAGGCTCAGGCTGAAGCTCAAGGAGAAGCTGAACGCTCAGAAGGTAATTAAC
CACCACCAAATCGCCTCCCTCTTCTTCTATGTGCTACTGTAATGTAGATATGCTAATTTT
GTGTGTGCTGATGATGTTGGCGTTTGAAATGACTGCAGAACAGAGAGCAAACTAGGATGC
CCCTGGGCAGGCTGGACGAGAACTCGGCGTGCAAGTCGCAGAAGAGGGAGCACAACAGGG
TGCCCCTCGGCAGGCTGGACGACAACTCTGCGTCGAAAACGCAGAACAGAGAGCGGAGCA
GGGTACGCCTTGGCAGGCTCGACGAGAACGCGTGCTGATGATTACACGGCATCAGATTTT
TTATCTGACTTGGATGCTCACTACTGAAGATTTGGTTGTGAAACCATGGTTTCTCCAACC
CAACCAGCCCCTGATCTAACTTATCTGTGTGGGTTCTTGTGCTGTTACTTTGCACGTTCG
CCGGCAGAGCGTGAGAGGATTTGGCTGTATTTTTTAGTCGTGTTCTCAACTTGTATCAGA
GTGATGATTGTTTAGCTTTAATAACTTCTAGGTGGTGGCCTCGTGTCACTTACAATAACA
GAGTGTTTGTTGCTTATCTTGTCTCGGTGTTTGTCTGCGTATCCACTTTCAATTCAAAAG
ATGGAAGTAATGGTGTATCTGTCTTTGTTACTGGTAGATCATGGATGTTCGTGTGTGGAG
ACAGAAGTATTGAAACCGCAGACTCAACAAAGGATGTTCGTGTGACTCAACAAGGCGAGT
AGGTTCAGTGCAGACATGCATGGAGATCGTTTCTTATTTCTTATTTTGAGTCACAGAGCT
GAAAAAAAGGGCAAAAAAAACACTTTTGAAACGAAGCACATTGAACCGAAGTGCTGTCTG
ATCCAACAAATTCTTTGGATCCCTGAAGAACTCTGAAACTGTCGAATTGCACTGTAACTA
ACTGAAGAAAACACTTTTGGGACACAGCCGCACAGACCTCAAACACAGCTCGAACCGGCA
TCTTTTTTTTTCGAACCAGGCTTTCTTCCCTTTCCATTACTTTCATAACGGAAATACAAT
GTTTTGAGACCATGACCAGAAAGAGAGGGAAAGGGAAAAAAGCGAGTTCGGGACAATATC
AGGAAACCCACCGTTCACGCCTGTCGTCAGGAACATGAACTGCGGGGCGAAAACCTGATA
TCAACTGAAACAACACAACAAAGGCCAAAAGTATTACACTACCATGAATCAGTACCACTA
CCAGGAGCCCCACAACAACCACCACCAAACCAGGCTCACCAAAAGAGCACAGAAATAAAC
CGAAAAGTTTTCACCAAATGGGACATAAAGCCTAAAGCATCACCATGGACA