Contig Data
morexGenes
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Map Locations of contig_277097 (3160 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_277097

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_45280 1 1239 bp MLOC_45280.1 Available Available LOC_Os01g73220.1, FRAME:-2, EVALUE:2e-122, 13101.m07991 protein peroxidase precursor, putative, expressed





CDS Structure of MLOC_45280






Contig Sequence (3160 bp)

>contig_277097 3160 assembly3_WGSMorex_rbca.fasta
AGGCCCGTTTTCCACTAGTGGGAGTATTATTGTATTGTTATTCAATCCTTGACTTCTTGT
CTAGTCCTTAAAGTTGATTTTGTATGTTATGTCTTGTGTTGTATCTAAATAAGCAAGTAG
CTATATAGCGTGCGGTGAAGGTGGAGAGACACACACATATACGATAACTTTGCATGCTTT
TCAGACATAGTGTTGAAGAATAGAGTACATATAGAAGAGCAGTTTCAGTTTCTTATTTAG
GTTCTCTAGCCTAACCTGAACCTGGATTGGATGGGAATCATGTTGAAATTACAAACCGAT
TTGTAAGAAGGAACTTACATAGTTACATTTAGTCTGTACACCAAACCTTACGGCTTCGAC
CTGCTCAAGGTTTGGTTTCCATATAGGCTGATGCATTGCTGATGAATGAGGAGATGGTGG
ATGTGCAACATTAGCTTTGGTCTTATAATCAAACACATTAAGCATCGCTAGAATGGTGAC
CAACCAGCTACCCTACGTGGCGCATGCTGGTTGGTCGCAGTAGGAAAGTCTTTGATTTTT
TAGAGTTCTTTTCAAAATGAAATTGAGACCTTTTCTTTTCCTTTTGAAGAAAAGTTTTTT
AGGTTTATTTTTTCTTTTTGAGATGGATGTGATGTTCATATGACACAAGATTTTTTAATT
TCAAAATGAAGGTATGATATGCACAACTTTCTCTCAAGCGGCCCGCAACGGCAAGCCCGA
ACCACTAGTGTGTTTGCATTTTCCTCATCGTTCTCTGCATGACTAATAAATTTGGACATA
TATAGAACAAATAGTGTGATCATTTTACTTCGTATGATCAAGAACCTAGTTAAAAAAACC
GGACCGGACCGGCGGTCGGACCAGAAAAAACCGGAACTGGCAGCCTCATCGGTTTTTTAA
GCTAATAAGACCGTTCTGCAATCGGCCCGGAGAAAACCGGTTGAACCGGTTGGTTTTCTG
GAAAACCGATGAAAAACCGGGTCACTAAACCGGGAAAATCAGGAAAATATGTTAATATAA
ATTGGGAGAAGTGAGATTCAATCTCAGGTCGCGTGAGCAATACGCGAGGTCCCCCACGGC
CCTATAACCAACCCGGCTATGCTACTTTGTTGTTCACGATATGAAAATAATTTTATTTGA
TCATTGCTTCACATTATATTAGCACATATATTAATGAACATTTATTCTTTTTGGCTTAAA
AACTGGCAATCGAACCGGTGAACGGACGGTCCGACCGGTAAAAACCTGAACCGACAACAT
TTTCGGTTCGATTTCTGGTTCGATATTTAAAACTATGATCAAGAAATATATGTGGCACTA
ACCACGTACTAAATTTTTTATTGCATGGAACCTGAGAAAATACGCGTTCTATGAATTTTT
TCTTACAAAAGTCATGTTATCTTTTTTGAAACATTTATTTCAGGGAAAGAATAAAATTTA
TTCACAATATTTTGATCGAAATTTGGTCTTTTTCGAAAAGAAGTCAAAGTATAATTTTGT
TTTTGTGATTTTTTTTCTTACAAGTGCACTAAAAGGTCAAGTTTATTTCAAAAATATTTT
CAGATTTTTTTTACTTTTTGTTGAATTGCTTCCAATGAATTTACTTTAAAAATATTTACT
TTATTTTAAGTTTGTTTACTTTTATCACCAAAATGAAAATCTTCAATGAAAAAAAAGAAA
TTTGAACAAAAAGCCAGGTGCTAATGTCTAGCACATGCCAACCCGAAGTATGCAATTGCG
CTATTTTTATTTACGACTGTGCCCTCATAGGAGGTCTTTTCACTGCATTCGTTTTGATCC
GTGCGCACTTATCGGTGCTGGGTCACGGATGGGCTCGGAGGCCATCTTTTCGTCCGTGCG
CACCTCTTGGCACCGGGTCACGGGTTGGGCTCAGTGGCCTCTTTCATTTGTGCACCTTGG
CATCTTTCGCAGCCGTGCATGATCCCATGTTGACGATTCAATAGGCAGAGTCACACTTTA
ATTAAACTTTCGGTATGGTGCTAACCCGGCCACTCGGATGAGCCCGTTCCCCTTCCACCT
GGACATTCGCCGCAGCCACTCCAGCGGCGTTCGCCACGGTCTGGACGAGGGACAGCCACT
CCAGGGCGAGGTTGCCGTCGACGGTGCCGGGGTTGCGGGCGGAGCAGTTGCGGCGGACCT
GGCCCTGGCCGCCGATGAGCACCTTGATCTGGCCCATCTTCACCATGGACACGCCGAACT
TGTTGAAGAAGTTCCGCTGGCTGCGGGCGAAGCGCTCGACGATGCGATGGGCCGGGTGTT
GGCGTTGGTGAACAGGTCCTGGTCGGACACGAAGAGCCCCTCCCGGTTCACCAGGTTCAC
GCAGTACTTGTTGTCGAACACGTCGGGCGTGCGCACGTCCAGCGGTGTGCGGCGGTCCGT
GGGCACGTCCGCTTCAGCCTGCCGAGGAAGTCCCAGCTCATGGTCGGGTCGGGGCGCGGG
AAGAGGCGGCCCTCGAAGGAGGTGCAGTGCGCGAGCCGCATGGTGTGCCCGCCGGAGAGC
GCGACGAGGTCGGTGGCGTCGAGGCCGAGCGAGCCGACCACGTTGAGGAGGGACGGCACG
GTGGACGTCGGCGCGGGGAGGCCGGACAGCACGTCCTGCTGCGTGGCGAACTGCGGGCTG
TCGCGGCGCCCGAGGGGCACGCGGTACTCCGGACCGCCGGAGGCCACCACGGAGTCGCGC
GCGGCGAGCGCCCGGATGTCGGAGCAGGACACCACGGCGCCGCGGCACTCGCGCTCCAGC
CGGTCGCGGATGTCGTTGATGGCCTTGAAGGCCGACGGGCGGAGTGTCAGGCGCCTGCTG
CTCCCCCGGCCCCGTCGCCGACCCGTCCAGGAGCACCGACGCGTCGCAGCCCTGCATGCA
CGCGATCATGCCGTGATCTCATGCATGAGACGCGCACCCATGTCCATGGCATGGATGCAT
GAACTGACTAACGCATTGATATGACTATGAGGCAAGGCAAGGTAGGTACCTGGACGAAGC
AGTCGTGGAAGTGGAGGCGGAGGAGGCCGGCGGCGAGGCCGACGTCCTTGCGCACGGCGT
CCCGGACGAAGTGGCGCACGATGGACGCCGCCCTGGGGCAGCTCCGCTTGTAGAAGTCCA
AGGACAGGCCGCGAGTAATCGGAGGCTGCCTCAACCACAA