Contig Data
morexGenes
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Map Locations of contig_276868 (3762 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_276868

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_45238 1 357 bp MLOC_45238.1 Available Available LOC_Os12g25090.2, FRAME:+3, EVALUE:3e-18, 13112.m02544 protein expressed protein





CDS Structure of MLOC_45238






Contig Sequence (3762 bp)

>contig_276868 3762 assembly3_WGSMorex_rbca.fasta
ACTAAAGGCTCCTTACGGGTCAGGACCAAAGCCTCGTGGACGGCATTGCGATCTGGGGCG
ACGTGGTCGGGCCTTTAGTCCCGGCCTAGAGGGAGACCGGGACTAAAGGGTCCAGGCCAA
AGACCCGTTTTCCACTAGTGGCAGTAATTGCGGTTGGCCTTTCATCGCCCATTATTATTT
CGTTGTGGGGCATGTACTCTCGAAAAATATGACCTTCGCACATGCATCCATTACTCAAAC
CGTCGGCATAGTTACTACCTATTGTCAATTGCAGACCATTGCTATATTTAACCGTGTCCA
ATGTGATCAGCAGGCATGTTCATGAAATATTTTCTTTGAATTACGTGATTTTTTCACATC
TAGCAGTTTCCAAAAAGTTCACAAAAAGTTTTTACACCTGAAGATTTTTTAAATATCACG
AACCTTTTTTTATTGAATATTATCAACATTTTATAGAAGCTGCACCATAATATTTTAATA
TGCATTGAAATCTATTAAATGTTCACAAAAAGTAAACTAAAACGAAAATACAACTACGTA
ACAAACCCACGCTGTGCTTTTGGCCGGCCATTATAAAAAATAGTACTTCGCTGCAGGGCT
GGCCATTATAAAAAATAGTACTTCGCTGGACAGACATCACTGGGCCTCAAAATAAAAAAT
AGTACTTCGTGCAGGGCGGACACCACTGGCCGGCGAGTAAAATGCATCAGTCGTCCCTCA
ACTTGCTGGCAATGATCAAAACGGTCCCTAAACTCTGAAAGTGATCCAATATGGCCCTTA
AACTTGCAAATACAATGTCAGTACGGTCCTAAAACTTGTGCAACCAGTCCTGGGCTATGC
ACGCGCTTACTGCTCGTGTACGTCGTGACGTCCACGTCAGTTATGCATGAGTTCGCCGAC
AACCGCTAACAATCCTTTGTGTTCTTGTGTTAGACCCCCGGATCTGCCTAGGGACGGCGG
ATGAGCGAAGTAGCTCGCCGCCGCATCTGTCGGCACTGCTCGGCTGTATCGATGGGTGCC
CCGATACAACGGCTGGACAAGGTTGCGGCTCCAACGTACGGTAACTCAAAATTATCCAGG
TGTGACATGTTTTTTGTTAAGATCGACTCATTCCCAAGTGGATTAAGCAATGATTTCTGA
TTCCCCTATGGTCTGCTGTTCGATTCATGGAATTTCATACGCATTACGCTAGGGTTTATT
GAATATAGGGTTACTGAAAGTGAGCGCTCGTCATGTTTGATCATGCTCTGTTTCAAGTGA
GCGACTGACTTGCTTAATTACGCTCTGTTTCAAGGAAAAACAACCCTTTTCTCACTCATG
GGGAGGCTGCAAGGCAACAAGCTTGGGACATGCAGAATAACTAAGTGCATGCATTTTTTT
AACGGAGGTAAAAGATTTGCCTTATGCATTAATTAAGTAGAAGTTGAGAGTTGCTTTTAC
AACCAAAAGCAAAAAAATCATTACAAAGCCATTACTCTCGCGGTAGGATCATGCTCAAGT
GCTTAGCGCCAGCCGTAACACATAGCATTGCTTCATTCTTGATGTTGGAGAGGAGGACGG
ATGGCAGCGAGTACTTGTGCCTGAATACTCTAGCATTCCGCTCACTCCAAACTGTCCAGC
AGACAAGCATTTATAATCTGTCAAAATTCAGTACTGCACAAGTGCATGCAGATACAAGTT
GGTCTCAAAAATCATTACTGTACATGTATTCACGGTCTCAATTCATATATTCAATCTAGC
AGACGCAAGATGGATAGGTGTCGAGGTTGCCGCCGTCGACGTCGACAGAACTATCTGTCA
CGGTGGCGCCGCCCATCGTGCTCGATGCAAGGGCATCGTGGGGGTGGATTAGAATACTTG
GTGGACGCGATTTGTGAAGCTAAGGATTGCGGCTTGGTTTCGGGATTTTGACCAGGAGAC
GACCAGATTTTTTGACTGTGGGCCCTCTTTGCTAACATGGCTGACGTGGACATGGCACCG
TACGCGAGCAGTACGAGCATACCTAACTTAGGACTGGTTGCACGAGTTCCAAGACCGTAT
TAACATCATATTCGCAAGTTTAGGGATTGTATTGGATCAGTTTCAGAGTTTAGAGACCGT
GTTGGTCCTTGCCAGCAAGTTGAGGGACGATTGATGCATTTTACTCCTAGGCCGGCCAAG
TAAATTTCCTTTGCTGGCTTTTTTTGGATTTCTTGTACTTTTTTTCCTCCTATGTTTCGG
TTTTTTTCTCTTTTTTTAGTTTTCTTATTTCTGATTTTTATATTTTGCACTTTTTTATTT
ACAATGAACTTTGTGTATTGTACGGTGATTATGATCATTTTTTATAATCTATGGTGATTT
TCAACAAATGTACTATGAACTTTGTTTAGTATACGACGAACATTTTACATATACACACTG
AACTTTCTCTATGATATATAATGATCTTTATTTTGTATACATCGAACATATTTTTGATAC
ACATTGAACTGTTTTAGACACACGATGAACTTTTTTATATGCATTGATTTTTTTATGATA
TGCGATGAACATGTTTTTAATGTATAATGAAGATTTTTTTTTTTGTATTTGTCAAACATT
TTTTAAGATACATGTAGCTTAAATTTGAATTATACCGAAAAGAACTAGATATTAGTATCT
CAAATTTGTTTCCTAACTATATGCCATTAACATTATTATGTAGTATGTTCCATGTAGAAA
AAAATGAAGTATTGTAGATAAATATTTTTGAAAGCTAGTACACAAGGTACGTTCACTTGA
TGTTTCAAAATAAAACATATAAATTATTACATATGAAGATAGAACATGTAGATATTTTGG
TGAAGACTAATGTGAAAGGGAGTTGTAGTGTAAACTTGAAGGGAAAGAAAAAAAATGTTT
TATGGACGGCAAACTTGTGTTCGCTGAAGTACACACTTCTTAGCTTGCCTTGAATTAATC
TTATGATGGTGAGGCTACTACAACAATGTTGGTTCTTTACGCTGAGAAATGTTCTCTATC
CACTTTGTTGAGTTGTATGCAGTGGCATGTTCTTCTCCAACCAAAAAAGGCCGGGCATGT
GATGATTCTTTTATTGTTAATTAGAAGTGTACACCACGATATGACAAGCTTCGATGATGC
TCTGTGCAAGATTTCATTGAACCTTTTCTCCTCAAGATAGATAAGCATTACTTTATCTGG
TGATGTGTAGGCACGTAATACTGACTAAATAAAGCCAAATTGGATATGTTCTTTCAAGCT
ACCACCATCCATGTGAAGTTAGCATGGAGTACATCGTTAGCTTACTTTGTGTGCACAACA
GCACAGTATAAGGAATTGAGCCTGATTGCCTATATATACACATTAAACTGATGACATGAC
AGTTCAAGATCTCACAGTCACATCGGCGATCTAATCAGTCTCACAGGTACGTTAGGATGC
ACATGCTAGATCTACTCTATTATTATAATTTTCTGAAGGTGATTTTGTATGACAGTTTTG
GTTATTTGTTTTGATCAAAGGAAGCGAGCGTAACAAGGATGAGTTCAGTGGAGAAGAAGC
CGGAGGGAGTGAACACCGGTGCTGGTGACCGTCACAACCTGAAGACAGAGTGGCCAGAGT
TGGTGGGGAAATCGGTGGAGGAGGCCAAGAAGGTGATTCTGCAGGACAAGCCAGAGGCGC
AAATCATAGTTCTGCCGGTGGGGACAATTGTGACCATGGAATATCGGATCGACCGCGTCC
GCCTCTTTGTCGATAAACTCGACAACATTGCCCAGGTCCCCA